Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P03
         (167 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB...    66   6e-12
AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p pro...    64   2e-11
AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA...    64   2e-11

>AE013599-2306|AAM68504.1|  147|Drosophila melanogaster CG8332-PB,
           isoform B protein.
          Length = 147

 Score = 66.1 bits (154), Expect = 6e-12
 Identities = 32/52 (61%), Positives = 36/52 (69%)
 Frame = +1

Query: 10  MAEVDEXXXXXXXXXXXXXXGVDLDQLLDMPNEQLMELMHARARRRFARGLK 165
           M +VDE              GVDLDQLLDMPN QL+ELMH+RARRRF+RGLK
Sbjct: 1   MQQVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLK 52


>AY070991-1|AAL48613.1|  148|Drosophila melanogaster RE08270p
           protein.
          Length = 148

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = +1

Query: 16  EVDEXXXXXXXXXXXXXXGVDLDQLLDMPNEQLMELMHARARRRFARGLK 165
           +VDE              GVDLDQLLDMPN QL+ELMH+RARRRF+RGLK
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLK 53


>AE013599-2305|AAF57984.1|  148|Drosophila melanogaster CG8332-PA,
           isoform A protein.
          Length = 148

 Score = 64.5 bits (150), Expect = 2e-11
 Identities = 31/50 (62%), Positives = 35/50 (70%)
 Frame = +1

Query: 16  EVDEXXXXXXXXXXXXXXGVDLDQLLDMPNEQLMELMHARARRRFARGLK 165
           +VDE              GVDLDQLLDMPN QL+ELMH+RARRRF+RGLK
Sbjct: 4   QVDENLKKKRTFKKFTYRGVDLDQLLDMPNNQLVELMHSRARRRFSRGLK 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,597,180
Number of Sequences: 53049
Number of extensions: 84278
Number of successful extensions: 178
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 24,988,368
effective HSP length: 36
effective length of database: 23,078,604
effective search space used: 438493476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)