Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P01
         (149 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.091
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   3.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   4.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   6.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    19   6.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    19   6.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    18   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.091
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = -2

Query: 133 FYCRLVL---HFLWCLLYFEACFV 71
           FYC  ++   HFL C  YF   F+
Sbjct: 85  FYCPFIIFTVHFLLCTYYFYYAFI 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 2    YSARGPKVLLKVG 40
            Y +RG KVL+ +G
Sbjct: 2387 YKSRGVKVLIALG 2399


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 73  QSTLQSTVDTTKNVAQVCSRNWKKL 147
           Q ++ + +DT   V+ +    W KL
Sbjct: 97  QQSVTALLDTGSEVSCISEEVWSKL 121


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -2

Query: 148 ITFSSFYCRLVLHFL 104
           + F  FY + +++FL
Sbjct: 146 VEFFQFYAQFIVYFL 160


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 148 ITFSSFYCRLVLHFLWCLLYFE 83
           +TF   +  LV + LW  L F+
Sbjct: 504 VTFPHLFNGLVDYSLWKALIFQ 525


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -3

Query: 144 LFPVSTADLCYIFCGV 97
           + PV+   +CY   G+
Sbjct: 504 IIPVTLTSVCYFMIGL 519


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 129 TADLCYIFCGVY 94
           TA++CY   G Y
Sbjct: 242 TAEMCYKLQGFY 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.309    0.118    0.326 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,628
Number of Sequences: 336
Number of extensions: 523
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 30
effective length of database: 112,505
effective search space used:  2137595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.2 bits)