Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_P01
         (149 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      26   8.2  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    26   8.2  
AE013599-3615|AAF47016.1|  114|Drosophila melanogaster CG13559-P...    26   8.2  

>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 64  DTVQSTLQSTVDTTKNVAQVC 126
           D V+ +LQS  +T  N+A++C
Sbjct: 439 DQVKISLQSIAETPNNIAEIC 459


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 64  DTVQSTLQSTVDTTKNVAQVC 126
           D V+ +LQS  +T  N+A++C
Sbjct: 387 DQVKISLQSIAETPNNIAEIC 407


>AE013599-3615|AAF47016.1|  114|Drosophila melanogaster CG13559-PA
           protein.
          Length = 114

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 135 VSTADLCYIFCGVYCTLKRALYRIFSRIDVTFPTFKSTLG 16
           V++  + +  CG+ C L   +   F+ I  + P  K+TLG
Sbjct: 64  VASGIVLFTTCGIGCWLIPCILDCFNEIHHSCPVCKATLG 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.309    0.118    0.326 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,276,404
Number of Sequences: 53049
Number of extensions: 78570
Number of successful extensions: 147
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 24,988,368
effective HSP length: 30
effective length of database: 23,396,898
effective search space used: 444541062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)