Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O24
(404 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 153 3e-38
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 153 3e-38
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 153 5e-38
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 147 2e-36
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 147 2e-36
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 105 9e-24
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 62 2e-10
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 62 2e-10
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 62 2e-10
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 62 2e-10
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 62 2e-10
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 61 3e-10
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 60 6e-10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 59 1e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 59 1e-09
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 59 1e-09
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 59 1e-09
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 57 6e-09
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 57 6e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 56 1e-08
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 55 2e-08
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 55 2e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 54 3e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 54 3e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 52 1e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 52 2e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 52 2e-07
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 51 3e-07
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 51 3e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 51 3e-07
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 51 3e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 5e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 50 6e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 48 3e-06
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 48 3e-06
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 45 2e-05
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 45 2e-05
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 45 2e-05
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 45 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 44 6e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 44 6e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 44 6e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 44 6e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 44 6e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 43 7e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 43 7e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 43 7e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 42 2e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 42 2e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 41 3e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 41 3e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 7e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 7e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 9e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 40 9e-04
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 39 0.002
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 39 0.002
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 39 0.002
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 39 0.002
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.011
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 36 0.011
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 36 0.011
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.015
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 35 0.019
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.026
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 35 0.026
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 35 0.026
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 35 0.026
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.026
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.026
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.026
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 34 0.045
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 33 0.10
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 33 0.10
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 33 0.10
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 33 0.10
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 33 0.10
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.18
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 32 0.18
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 31 0.31
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 31 0.31
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 30 0.55
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 30 0.55
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 30 0.55
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 30 0.55
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 30 0.73
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 30 0.73
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 29 0.96
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 29 1.3
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 1.7
AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical ... 29 1.7
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical p... 28 2.2
Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical pr... 28 2.2
U64604-1|AAF98623.1| 243|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 27 3.9
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 27 5.1
U13875-13|AAA21156.2| 470|Caenorhabditis elegans Hypothetical p... 27 6.8
AF100305-1|AAC68918.1| 197|Caenorhabditis elegans Hypothetical ... 27 6.8
AC084157-1|AAK68492.2| 185|Caenorhabditis elegans Hypothetical ... 27 6.8
U55370-7|AAA97998.2| 388|Caenorhabditis elegans Hypothetical pr... 26 9.0
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 26 9.0
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 26 9.0
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 26 9.0
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 153 bits (372), Expect = 3e-38
Identities = 79/134 (58%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
+GYGFVHFETEEAA +I+KVNGMLL GKKV+VG+F PR +R +ELGE AK FTNVYVKN
Sbjct: 97 KGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKN 156
Query: 188 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELV 367
FG+ ++ E L+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +
Sbjct: 157 FGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTI 214
Query: 368 EGK--PLYVGRAQK 403
EG L+V RAQK
Sbjct: 215 EGTDLKLHVCRAQK 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 12/144 (8%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----- 166
+G+GFV F E A +++ ++ + G K++V R + ER EL +K +
Sbjct: 189 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERM 248
Query: 167 -----TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAE 331
N+YVKN E D+ LK FE YG ITS KVM ++G S+GFGFV FE P+ A
Sbjct: 249 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEAT 308
Query: 332 RACMELNGKELVEGKPLYVGRAQK 403
A E+N K +V KPLYV AQ+
Sbjct: 309 SAVTEMNSK-MVCSKPLYVAIAQR 331
Score = 66.1 bits (154), Expect = 9e-12
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMEL 349
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 350 NGKELVEGKPLYVGRAQ 400
NG L+ GK ++VG+ Q
Sbjct: 118 NGM-LLAGKKVFVGKFQ 133
Score = 33.1 bits (72), Expect = 0.078
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
+G+GFV FE E A ++ ++N ++ K +YV +++R +L +
Sbjct: 294 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQ 342
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 153 bits (372), Expect = 3e-38
Identities = 79/134 (58%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
+GYGFVHFETEEAA +I+KVNGMLL GKKV+VG+F PR +R +ELGE AK FTNVYVKN
Sbjct: 160 KGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKN 219
Query: 188 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELV 367
FG+ ++ E L+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +
Sbjct: 220 FGDHYNKETLEKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTI 277
Query: 368 EGK--PLYVGRAQK 403
EG L+V RAQK
Sbjct: 278 EGTDLKLHVCRAQK 291
Score = 95.9 bits (228), Expect = 1e-20
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 12/144 (8%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----- 166
+G+GFV F E A +++ ++ + G K++V R + ER EL +K +
Sbjct: 252 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERM 311
Query: 167 -----TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAE 331
N+YVKN E D+ LK FE YG ITS KVM ++G S+GFGFV FE P+ A
Sbjct: 312 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEAT 371
Query: 332 RACMELNGKELVEGKPLYVGRAQK 403
A E+N K +V KPLYV AQ+
Sbjct: 372 SAVTEMNSK-MVCSKPLYVAIAQR 394
Score = 74.5 bits (175), Expect = 3e-14
Identities = 41/130 (31%), Positives = 73/130 (56%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
GY +V+F+ A ++++ +N L+GK + + + R + G N+++KN
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRI-MWSQRDPAMRRSGAG-----NIFIKNL 127
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVE 370
+ ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++NG L+
Sbjct: 128 DKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGM-LLA 186
Query: 371 GKPLYVGRAQ 400
GK ++VG+ Q
Sbjct: 187 GKKVFVGKFQ 196
Score = 33.1 bits (72), Expect = 0.078
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
+G+GFV FE E A ++ ++N ++ K +YV +++R +L +
Sbjct: 357 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQ 405
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 153 bits (371), Expect = 5e-38
Identities = 79/134 (58%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
+GYGFVHFETEEAA +I+KVNGMLL GKKV+VG+F PR +R +ELGE AK FTNVYVKN
Sbjct: 160 KGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKN 219
Query: 188 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELV 367
FG+ ++ E L+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +
Sbjct: 220 FGDHYNKETLEKVFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTI 277
Query: 368 EGK--PLYVGRAQK 403
EG L+V RAQK
Sbjct: 278 EGTDLKLHVCRAQK 291
Score = 94.3 bits (224), Expect = 3e-20
Identities = 57/144 (39%), Positives = 79/144 (54%), Gaps = 12/144 (8%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----- 166
+G+GFV F E A +++ ++ + G K++V R + ER EL +K +
Sbjct: 252 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERM 311
Query: 167 -----TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAE 331
N+YVKN E D+ LK FE YG ITS KVM ++G S+GFGFV FE P+ A
Sbjct: 312 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEAT 371
Query: 332 RACMELNGKELVEGKPLYVGRAQK 403
A E+N K +V KPLYV Q+
Sbjct: 372 SAVTEMNSK-MVCSKPLYVAIGQR 394
Score = 74.5 bits (175), Expect = 3e-14
Identities = 41/130 (31%), Positives = 73/130 (56%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
GY +V+F+ A ++++ +N L+GK + + + R + G N+++KN
Sbjct: 74 GYAYVNFQQPADAERAMDTMNFEALHGKPMRI-MWSQRDPAMRRSGAG-----NIFIKNL 127
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVE 370
+ ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++NG L+
Sbjct: 128 DKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGM-LLA 186
Query: 371 GKPLYVGRAQ 400
GK ++VG+ Q
Sbjct: 187 GKKVFVGKFQ 196
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
+G+GFV FE E A ++ ++N ++ K +YV +++R +L +
Sbjct: 357 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIGQRKEDRRAQLASQ 405
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 147 bits (357), Expect = 2e-36
Identities = 78/136 (57%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYV 181
+ +GYGFVHFETE +A +IEKVNGMLL+ KKVYVG+F PR +R KELGE +TNV+V
Sbjct: 183 NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFV 242
Query: 182 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKE 361
KNFGE E L MF K+G ITS VM G +GFGFVAF D DAA +A +LN
Sbjct: 243 KNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN-DS 301
Query: 362 LVEGK--PLYVGRAQK 403
++EG L V RAQK
Sbjct: 302 ILEGTDCKLSVCRAQK 317
Score = 104 bits (250), Expect = 2e-23
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----- 166
+G+GFV F ++AA +++EK+N +L G K+ V R + ER EL K +
Sbjct: 278 KGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERV 337
Query: 167 -----TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAE 331
N+YVKN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A
Sbjct: 338 QRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEAT 397
Query: 332 RACMELNGKELVEGKPLYVGRAQK 403
A ++N K ++ KPLYV AQ+
Sbjct: 398 AAVTDMNSK-MIGAKPLYVALAQR 420
Score = 68.1 bits (159), Expect = 2e-12
Identities = 38/130 (29%), Positives = 71/130 (54%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
GY +V+F+ A ++++ +N +++G+ + + + R + G N+++KN
Sbjct: 99 GYAYVNFQQPADAERALDTMNFEVIHGRPMRI-MWSQRDPAARRAGNG-----NIFIKNL 152
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVE 370
++ + D F +G I S KV D+G S+G+GFV FE +A+ A ++NG L+
Sbjct: 153 DRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGM-LLS 211
Query: 371 GKPLYVGRAQ 400
K +YVG+ Q
Sbjct: 212 DKKVYVGKFQ 221
Score = 33.9 bits (74), Expect = 0.045
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
+G+GFV FE E A ++ +N ++ K +YV +++R +L +
Sbjct: 383 KGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQ 431
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 147 bits (357), Expect = 2e-36
Identities = 78/136 (57%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYV 181
+ +GYGFVHFETE +A +IEKVNGMLL+ KKVYVG+F PR +R KELGE +TNV+V
Sbjct: 183 NSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFV 242
Query: 182 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKE 361
KNFGE E L MF K+G ITS VM G +GFGFVAF D DAA +A +LN
Sbjct: 243 KNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN-DS 301
Query: 362 LVEGK--PLYVGRAQK 403
++EG L V RAQK
Sbjct: 302 ILEGTDCKLSVCRAQK 317
Score = 104 bits (250), Expect = 2e-23
Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 12/144 (8%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----- 166
+G+GFV F ++AA +++EK+N +L G K+ V R + ER EL K +
Sbjct: 278 KGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERV 337
Query: 167 -----TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAE 331
N+YVKN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A
Sbjct: 338 QRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEAT 397
Query: 332 RACMELNGKELVEGKPLYVGRAQK 403
A ++N K ++ KPLYV AQ+
Sbjct: 398 AAVTDMNSK-MIGAKPLYVALAQR 420
Score = 68.1 bits (159), Expect = 2e-12
Identities = 38/130 (29%), Positives = 71/130 (54%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
GY +V+F+ A ++++ +N +++G+ + + + R + G N+++KN
Sbjct: 99 GYAYVNFQQPADAERALDTMNFEVIHGRPMRI-MWSQRDPAARRAGNG-----NIFIKNL 152
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVE 370
++ + D F +G I S KV D+G S+G+GFV FE +A+ A ++NG L+
Sbjct: 153 DRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGM-LLS 211
Query: 371 GKPLYVGRAQ 400
K +YVG+ Q
Sbjct: 212 DKKVYVGKFQ 221
Score = 33.9 bits (74), Expect = 0.045
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
+G+GFV FE E A ++ +N ++ K +YV +++R +L +
Sbjct: 383 KGFGFVCFEKPEEATAAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQ 431
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 105 bits (253), Expect = 9e-24
Identities = 58/113 (51%), Positives = 77/113 (68%), Gaps = 2/113 (1%)
Frame = +2
Query: 71 NGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT 250
N + N KV+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G IT
Sbjct: 121 NIFIKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNIT 180
Query: 251 SHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGK--PLYVGRAQK 403
S +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V RAQK
Sbjct: 181 SCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVCRAQK 231
Score = 95.9 bits (228), Expect = 1e-20
Identities = 58/144 (40%), Positives = 80/144 (55%), Gaps = 12/144 (8%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----- 166
+G+GFV F E A +++ ++ + G K++V R + ER EL +K +
Sbjct: 192 KGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERM 251
Query: 167 -----TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAE 331
N+YVKN E D+ LK FE YG ITS KVM ++G S+GFGFV FE P+ A
Sbjct: 252 QKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEAT 311
Query: 332 RACMELNGKELVEGKPLYVGRAQK 403
A E+N K +V KPLYV AQ+
Sbjct: 312 SAVTEMNSK-MVCSKPLYVAIAQR 334
Score = 33.1 bits (72), Expect = 0.078
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
+G+GFV FE E A ++ ++N ++ K +YV +++R +L +
Sbjct: 297 KGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQ 345
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GFV F + + ++ K +++GK V R +PR ++ + E +YV
Sbjct: 65 GFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGV 121
Query: 191 GEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGISRGFGFVAFEDPDAAERACME 346
ED +++ML + F KYG +T S ++ K RGFGFV F+D D+ ++ ++
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Score = 34.3 bits (75), Expect = 0.034
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERACME 346
++V + +D+++++ + ++G IT VM +D SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVM-RDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 347 LNGKELVEGKPLYVGRA 397
+++GK + RA
Sbjct: 84 --RPHIIDGKTVDPKRA 98
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GFV F + + ++ K +++GK V R +PR ++ + E +YV
Sbjct: 27 GFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGV 83
Query: 191 GEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGISRGFGFVAFEDPDAAERACME 346
ED +++ML + F KYG +T S ++ K RGFGFV F+D D+ ++ ++
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 215 LKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYV 388
+++ + ++G IT VM +D SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVM-RDPTTKRSRGFGFVTFSGKTEVDAAMKQ--RPHIIDGKTVDP 57
Query: 389 GRA 397
RA
Sbjct: 58 KRA 60
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GFV F + + ++ K +++GK V R +PR ++ + E +YV
Sbjct: 27 GFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGV 83
Query: 191 GEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGISRGFGFVAFEDPDAAERACME 346
ED +++ML + F KYG +T S ++ K RGFGFV F+D D+ ++ ++
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Score = 27.9 bits (59), Expect = 2.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 215 LKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYV 388
+++ + ++G IT VM +D SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVM-RDPTTKRSRGFGFVTFSGKTEVDAAMKQ--RPHIIDGKTVDP 57
Query: 389 GRA 397
RA
Sbjct: 58 KRA 60
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GFV F + + ++ K +++GK V R +PR ++ + E +YV
Sbjct: 65 GFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGV 121
Query: 191 GEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGISRGFGFVAFEDPDAAERACME 346
ED +++ML + F KYG +T S ++ K RGFGFV F+D D+ ++ ++
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Score = 34.3 bits (75), Expect = 0.034
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERACME 346
++V + +D+++++ + ++G IT VM +D SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVM-RDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 347 LNGKELVEGKPLYVGRA 397
+++GK + RA
Sbjct: 84 --RPHIIDGKTVDPKRA 98
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 61.7 bits (143), Expect = 2e-10
Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GFV F + + ++ K +++GK V R +PR ++ + E +YV
Sbjct: 65 GFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGV 121
Query: 191 GEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGISRGFGFVAFEDPDAAERACME 346
ED +++ML + F KYG +T S ++ K RGFGFV F+D D+ ++ ++
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Score = 34.3 bits (75), Expect = 0.034
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERACME 346
++V + +D+++++ + ++G IT VM +D SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVM-RDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 347 LNGKELVEGKPLYVGRA 397
+++GK + RA
Sbjct: 84 --RPHIIDGKTVDPKRA 98
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 60.9 bits (141), Expect = 3e-10
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
GYGFV++ EE A +++ NG+ L K + V P ++ K +N+YV
Sbjct: 84 GYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKG--------SNLYVSGI 135
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKD-DGISRGFGFVAFEDPDAAERACMELNG 355
+ + L+ +F +G+I + +++ + G+S+G GFV F+ D A+ A LNG
Sbjct: 136 PKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
Score = 35.9 bits (79), Expect = 0.011
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACM 343
TN+ + + + E ++ +F G I S K++ K G S G+GFV + + A RA
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 344 ELNGKELVEGKPLYVGRAQ 400
NG L + K + V A+
Sbjct: 102 SFNGLRL-QNKTIKVSYAR 119
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNG 91
+G GFV F+ ++ A+ +I+ +NG + +G
Sbjct: 169 KGVGFVRFDKKDEADVAIKTLNGSIPSG 196
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 60.1 bits (139), Expect = 6e-10
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKA--KLF----- 166
+GYGFV F ++ A +I +NG + GK+ + RK E+ + ++F
Sbjct: 176 KGYGFVSFPNKQNAENAIAGMNGKWI-GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKA 234
Query: 167 --TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERAC 340
T+VYV N + +D L+D+F YG I ++ +K ++ + FV +E + A +A
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI-FK----TQRYAFVRYEKKECATKAI 289
Query: 341 MELNGKEL 364
ME+NGKE+
Sbjct: 290 MEMNGKEM 297
Score = 48.8 bits (111), Expect = 1e-06
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK-DDGISRGFGFVAFEDPDAAERACME 346
+V+V + +D S+E+LK F K+G ++ KV+ S+G+GFV+F + AE A
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 347 LNGK 358
+NGK
Sbjct: 196 MNGK 199
Score = 29.5 bits (63), Expect = 0.96
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKV 100
Y FV +E +E A K+I ++NG + G +V
Sbjct: 274 YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 59.3 bits (137), Expect = 1e-09
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYV 181
+ +G+GFV F EE A+ +I+ +N + L GK + V + E+ ++G N++V
Sbjct: 52 NHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNK-ASAHEKNMDVG------ANIFV 104
Query: 182 KNFGEDFSDEMLKDMFEKYGRITS-HKVMYK-DDGISRGFGFVAFEDPDAAERACMELNG 355
N + +++L D F +G I K+M D G S+GF F+ F +A++ A +NG
Sbjct: 105 GNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNG 164
Query: 356 KEL 364
+ L
Sbjct: 165 QFL 167
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 59.3 bits (137), Expect = 1e-09
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYV 181
+ +G+GFV F EE A+ +I+ +N + L GK + V + E+ ++G N++V
Sbjct: 62 NHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNK-ASAHEKNMDVG------ANIFV 114
Query: 182 KNFGEDFSDEMLKDMFEKYGRITS-HKVMYK-DDGISRGFGFVAFEDPDAAERACMELNG 355
N + +++L D F +G I K+M D G S+GF F+ F +A++ A +NG
Sbjct: 115 GNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNG 174
Query: 356 KEL 364
+ L
Sbjct: 175 QFL 177
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 58.8 bits (136), Expect = 1e-09
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 353 GKELVEGKPLYVGRA 397
G ++EG+ + V A
Sbjct: 214 G-SMIEGRKIEVNCA 227
Score = 29.9 bits (64), Expect = 0.73
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREK 139
+G+GFV E + A ++ ++++G ++ G+K+ V R +K
Sbjct: 192 KGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 58.8 bits (136), Expect = 1e-09
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 353 GKELVEGKPLYVGRA 397
G ++EG+ + V A
Sbjct: 214 G-SMIEGRKIEVNCA 227
Score = 29.9 bits (64), Expect = 0.73
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREK 139
+G+GFV E + A ++ ++++G ++ G+K+ V R +K
Sbjct: 192 KGFGFVTMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKK 235
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 56.8 bits (131), Expect = 6e-09
Identities = 33/116 (28%), Positives = 61/116 (52%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
+GYGFV FE+ +AA +++ +N G + + + + ++E++ TN+Y+ N
Sbjct: 148 KGYGFVDFESPQAAAAAVDGLN---TEGVQAQMAK-LQQQEQDP---------TNLYIAN 194
Query: 188 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNG 355
DF+++ML+ K+G + S +++ D SRG GF + + E LNG
Sbjct: 195 LPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 250
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGISRGFGFVAFEDPDAAERACM 343
TN+Y++ + +D++L++M KYG I S K +M K +G+GFV FE P AA A
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 344 ELN 352
LN
Sbjct: 167 GLN 169
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 56.8 bits (131), Expect = 6e-09
Identities = 33/116 (28%), Positives = 61/116 (52%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
+GYGFV FE+ +AA +++ +N G + + + + ++E++ TN+Y+ N
Sbjct: 122 KGYGFVDFESPQAAAAAVDGLN---TEGVQAQMAK-LQQQEQDP---------TNLYIAN 168
Query: 188 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNG 355
DF+++ML+ K+G + S +++ D SRG GF + + E LNG
Sbjct: 169 LPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGISRGFGFVAFEDPDAAERACM 343
TN+Y++ + +D++L++M KYG I S K +M K +G+GFV FE P AA A
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 344 ELN 352
LN
Sbjct: 141 GLN 143
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 55.6 bits (128), Expect = 1e-08
Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYVG-RFIPRKEREKELGEKAKLFTNVYVKNF 190
Y FV F A +++ NG L K+++V F PR+ E + +V+V +
Sbjct: 80 YAFVEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDL 139
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKDD-GISRGFGFVAFEDPDAAERACMELNG 355
+ L++ F K+G ++ K++ ++ +G+GFV++ + AERA E+NG
Sbjct: 140 CSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V N +DE L +F + G + K+++ +G++ + FV F D + A A N
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIF--EGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 353 GKELVEGKPLYV 388
G+EL+E K ++V
Sbjct: 100 GRELLE-KEMHV 110
Score = 31.1 bits (67), Expect = 0.31
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKV 100
+GY FV FET+E+A ++I ++N + G+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
Score = 30.3 bits (65), Expect = 0.55
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKERE 136
+GYGFV + E A ++I+++NG L G++ + RK E
Sbjct: 173 KGYGFVSYPRREDAERAIDEMNGAWL-GRRTIRTNWATRKPDE 214
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 54.8 bits (126), Expect = 2e-08
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF- 166
+GYGFV + E A ++IE++NG L G++ + RK E+ EK+ +++
Sbjct: 63 KGYGFVSYPKREEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 121
Query: 167 ------TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAA 328
T+VYV N DE ++ F +GRIT ++ +K +G+ FV F++ DAA
Sbjct: 122 QTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRI-FK----MQGYAFVKFDNKDAA 175
Query: 329 ERACMELNGKEL 364
+A +++N +++
Sbjct: 176 AKAIVQMNNQDV 187
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGI-SRGFGFVAFEDPDAAERACME 346
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 347 LNGKEL 364
+NG+ L
Sbjct: 83 MNGQWL 88
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 54.8 bits (126), Expect = 2e-08
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF- 166
+GYGFV + E A ++IE++NG L G++ + RK E+ EK+ +++
Sbjct: 73 KGYGFVSYPKREEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 131
Query: 167 ------TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAA 328
T+VYV N DE ++ F +GRIT ++ +K +G+ FV F++ DAA
Sbjct: 132 QTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRI-FK----MQGYAFVKFDNKDAA 185
Query: 329 ERACMELNGKEL 364
+A +++N +++
Sbjct: 186 AKAIVQMNNQDV 197
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGI-SRGFGFVAFEDPDAAERACME 346
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 347 LNGKEL 364
+NG+ L
Sbjct: 93 MNGQWL 98
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 54.8 bits (126), Expect = 2e-08
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF- 166
+GYGFV + E A ++IE++NG L G++ + RK E+ EK+ +++
Sbjct: 176 KGYGFVSYPKREEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 234
Query: 167 ------TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAA 328
T+VYV N DE ++ F +GRIT ++ +K +G+ FV F++ DAA
Sbjct: 235 QTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRI-FK----MQGYAFVKFDNKDAA 288
Query: 329 ERACMELNGKEL 364
+A +++N +++
Sbjct: 289 AKAIVQMNNQDV 300
Score = 53.6 bits (123), Expect = 5e-08
Identities = 29/118 (24%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFG 193
Y FV F A+++++ +N LL +++ V + +++ ++ + + F +V+V +
Sbjct: 86 YAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKI-DTTRHF-HVFVGDLS 143
Query: 194 EDFSDEMLKDMFEKYGRITSHKVMYKDDGI-SRGFGFVAFEDPDAAERACMELNGKEL 364
+ ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA ++NG+ L
Sbjct: 144 SEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWL 201
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 54.8 bits (126), Expect = 2e-08
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF- 166
+GYGFV + E A ++IE++NG L G++ + RK E+ EK+ +++
Sbjct: 144 KGYGFVSYPKREEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYN 202
Query: 167 ------TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAA 328
T+VYV N DE ++ F +GRIT ++ +K +G+ FV F++ DAA
Sbjct: 203 QTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRI-FK----MQGYAFVKFDNKDAA 256
Query: 329 ERACMELNGKEL 364
+A +++N +++
Sbjct: 257 AKAIVQMNNQDV 268
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/66 (28%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGI-SRGFGFVAFEDPDAAERACME 346
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 347 LNGKEL 364
+NG+ L
Sbjct: 164 MNGQWL 169
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.4 bits (125), Expect = 3e-08
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRF----------IPRKEREKELGE 151
H + + FV +E EAA + E +NG +L G+ + V +P+ + ++ +
Sbjct: 141 HHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQ 200
Query: 152 K-AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGIS-RGFGFVAFEDPDA 325
K AK + VYV + D S+ LK +FE +G I ++ G RGFG++ F + +
Sbjct: 201 KDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTS 260
Query: 326 AERACMELNGKELVEGKPLYVGR 394
A +N +L G+ L VG+
Sbjct: 261 QSEAIAGMNMFDL-GGQYLRVGK 282
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 125 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGISRGFGF 301
++R++ + + + +YV + + ++ML+ F+ +G I S + + G + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 302 VAFEDPDAAERACMELNGKELVEGKPLYV 388
V +E P+AA A +NG +++ G+ L V
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.4 bits (125), Expect = 3e-08
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRF----------IPRKEREKELGE 151
H + + FV +E EAA + E +NG +L G+ + V +P+ + ++ +
Sbjct: 141 HHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQ 200
Query: 152 K-AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGIS-RGFGFVAFEDPDA 325
K AK + VYV + D S+ LK +FE +G I ++ G RGFG++ F + +
Sbjct: 201 KDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTS 260
Query: 326 AERACMELNGKELVEGKPLYVGR 394
A +N +L G+ L VG+
Sbjct: 261 QSEAIAGMNMFDL-GGQYLRVGK 282
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 125 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGISRGFGF 301
++R++ + + + +YV + + ++ML+ F+ +G I S + + G + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 302 VAFEDPDAAERACMELNGKELVEGKPLYV 388
V +E P+AA A +NG +++ G+ L V
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKV 175
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 52.4 bits (120), Expect = 1e-07
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Frame = +2
Query: 2 HEEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRF----------IPRKEREKELGE 151
H + + FV +E EAA + E +NG +L G+ + V +P+ + ++ +
Sbjct: 141 HHKTFAFVEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQ 200
Query: 152 K-AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGIS-RGFGFVAFEDPDA 325
K AK + VYV + D S+ LK +FE +G I ++ G RGFG++ F + +
Sbjct: 201 KDAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTS 260
Query: 326 AERACMELN 352
A +N
Sbjct: 261 QSEAIAGMN 269
Score = 40.7 bits (91), Expect = 4e-04
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 125 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGISRGFGF 301
++R++ + + + +YV + + ++ML+ F+ +G I S + + G + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 302 VAFEDPDAAERACMELNGKELVEGKPLYV 388
V +E P+AA A +NG +++ G+ L V
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKV 175
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
+V+V N D S++ ++ +F K G + S K+++ ++ G +G+GF+ F D AE A
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 347 LNGKELVEGKPLYVGRA 397
LNG EL G+ L V A
Sbjct: 79 LNGYEL-SGRILRVDSA 94
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGK 94
+GYGF+ F + A +I +NG L+G+
Sbjct: 59 KGYGFIEFPDIQTAEVAIRNLNGYELSGR 87
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 51.6 bits (118), Expect = 2e-07
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKE------LGEKA---K 160
+G +V F EE+ + +NG L G + + R + R LG A K
Sbjct: 66 KGICYVEFWDEESVPLGLA-LNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNK 124
Query: 161 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERAC 340
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C
Sbjct: 125 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 184
Query: 341 MELNGKEL 364
+LN EL
Sbjct: 185 EQLNNFEL 192
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 51.6 bits (118), Expect = 2e-07
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKE------LGEKA---K 160
+G +V F EE+ + +NG L G + + R + R LG A K
Sbjct: 211 KGICYVEFWDEESVPLGLA-LNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNK 269
Query: 161 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERAC 340
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C
Sbjct: 270 GPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSC 329
Query: 341 MELNGKEL 364
+LN EL
Sbjct: 330 EQLNNFEL 337
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 51.2 bits (117), Expect = 3e-07
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 353 GKELVEGKPLYVGRA 397
G +EG+ + V A
Sbjct: 161 G-TTIEGRRVEVNLA 174
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 3e-07
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GF+ F + +K + L +GKK+ P++ + K L K K V++
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHEL-DGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGL 141
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERAC----MELNG 355
+ E +K FE YG++ +M+ K RGFGFV F+ + A++ C E+NG
Sbjct: 142 SATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEING 201
Query: 356 KELVEGK 376
K +VE K
Sbjct: 202 K-MVECK 207
Score = 35.9 bits (79), Expect = 0.011
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +2
Query: 209 EMLKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERAC----MELNGKELVE 370
E L+D F ++G + VM +D +RGFGF+ F DP + ++ EL+GK+ ++
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK-ID 116
Query: 371 GKPLYVGRAQ 400
K + R Q
Sbjct: 117 PKVAFPKRTQ 126
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 51.2 bits (117), Expect = 3e-07
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 353 GKELVEGKPLYVGRA 397
G +EG+ + V A
Sbjct: 161 G-TTIEGRRVEVNLA 174
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 51.2 bits (117), Expect = 3e-07
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+GF+ F + +K + L +GKK+ P++ + K L K K V++
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHEL-DGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGL 141
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERAC----MELNG 355
+ E +K FE YG++ +M+ K RGFGFV F+ + A++ C E+NG
Sbjct: 142 SATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEING 201
Query: 356 KELVEGK 376
K +VE K
Sbjct: 202 K-MVECK 207
Score = 35.9 bits (79), Expect = 0.011
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +2
Query: 209 EMLKDMFEKYGRITSHKVMYKDDGI--SRGFGFVAFEDPDAAERAC----MELNGKELVE 370
E L+D F ++G + VM +D +RGFGF+ F DP + ++ EL+GK+ ++
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK-ID 116
Query: 371 GKPLYVGRAQ 400
K + R Q
Sbjct: 117 PKVAFPKRTQ 126
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.4 bits (115), Expect = 5e-07
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 134 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAF 310
E +G + +FT ++V SD+ L + FE++G I V+ ++ SRG+GFV
Sbjct: 24 EPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTM 83
Query: 311 EDPDAAERACMELNGKELVEGKPLYVGRA 397
+D +AERAC + N +++G+ V A
Sbjct: 84 KDRASAERACKDPN--PIIDGRKANVNLA 110
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 50.0 bits (114), Expect = 6e-07
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLF---TNVYV 181
G+ +V E ++ A +++ K + + + G+ + FI + EK +G K + V+V
Sbjct: 633 GFAYVVMENDQKAQQALLK-DRVPVKGRPM----FISANDPEKRVGFKFSTTLEKSKVFV 687
Query: 182 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKE 361
+N +D+ LK +F K+G +TS + + DG +G FV F D +A+ + C+ K
Sbjct: 688 RNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDF-DTEASAQKCVASGDKL 746
Query: 362 LVEGKPLYV 388
++ + L V
Sbjct: 747 MLRERELEV 755
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 49.2 bits (112), Expect = 1e-06
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACME 346
T + VKN +++ L+ FEKYG+I+ + Y +G RGF FV F D +A A +
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 347 LN 352
N
Sbjct: 63 SN 64
Score = 45.2 bits (102), Expect = 2e-05
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 12/121 (9%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVG---------RFIPRKE-REKELGEKAK 160
G+GFV F T A +++ + G LL+G + + + RKE ++KE GE K
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTK 749
Query: 161 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGIS--RGFGFVAFEDPDAAER 334
L V+N + S + ++ +FE +G + + ++ K RGFGFV F D A R
Sbjct: 750 LL----VRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHR 805
Query: 335 A 337
A
Sbjct: 806 A 806
Score = 40.3 bits (90), Expect = 5e-04
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +2
Query: 122 RKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFG 298
R + E+ + EK ++++N ++ L+ +F+KYG ++ +V+ K G +GF
Sbjct: 264 RDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFA 323
Query: 299 FVAFEDPDAAERACMELNGKELVEGKPLYV 388
V F P+AA A L+G + +G+ +++
Sbjct: 324 IVEFVFPEAAVAAYSALDG-YVFKGRMMHI 352
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 1e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
+VYV N ++E L + F G+I + +++ ++ G RGF F+ F + +A+RA +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 347 LNGKELVEGKPLYVGRAQK 403
+NG E G+PL V A K
Sbjct: 66 MNGAEF-NGRPLRVNLANK 83
Score = 31.1 bits (67), Expect = 0.31
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
G+ F+ F E +A +++E++NG NG+ + V
Sbjct: 47 GFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRV 78
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +2
Query: 224 MFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRA 397
MFEK G + ++++ + G S+GFGFV ++PD A+RA E NG +EG+ + V A
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLA 56
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 47.6 bits (108), Expect = 3e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 353 GKELVEGKPLYVGRA 397
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 47.6 bits (108), Expect = 3e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 353 GKELVEGKPLYVGRA 397
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGISRGFGFVAFEDPDAAERACMEL 349
+YV + D ++ L +FEK G+I ++M G SRG+ FV + + + A A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 350 NGKELVEGKPLYV 388
+G E+ GKPL V
Sbjct: 262 DGHEISTGKPLKV 274
Score = 30.7 bits (66), Expect = 0.42
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKE 142
Y F+HF + K++E+ NG L G V P +E++K+
Sbjct: 412 YAFIHFNERDDCLKAMEEWNGKELEGTVVEASLAKPPQEKKKK 454
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 45.2 bits (102), Expect = 2e-05
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Frame = +2
Query: 2 HEEGYGFVHFET----EEAANKSIEKVNGMLLNGKKVY----VGRFIPRKEREKELGEKA 157
H G+GFV F + E A N K+ G ++ K+ + IP E +
Sbjct: 88 HSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGC 147
Query: 158 KLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERA 337
KL N S + L+ FE +G + +++ G RG GFV +ED ++A+R
Sbjct: 148 KLLLNGITNGV---HSVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRC 200
Query: 338 CMELNGKELVEGKPLYV 388
+G+ +V + + V
Sbjct: 201 LAHNSGRHIVNERKIEV 217
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 45.2 bits (102), Expect = 2e-05
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Frame = +2
Query: 2 HEEGYGFVHFET----EEAANKSIEKVNGMLLNGKKVY----VGRFIPRKEREKELGEKA 157
H G+GFV F + E A N K+ G ++ K+ + IP E +
Sbjct: 108 HSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGC 167
Query: 158 KLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERA 337
KL N S + L+ FE +G + +++ G RG GFV +ED ++A+R
Sbjct: 168 KLLLNGITNGV---HSVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRC 220
Query: 338 CMELNGKELVEGKPLYV 388
+G+ +V + + V
Sbjct: 221 LAHNSGRHIVNERKIEV 237
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 45.2 bits (102), Expect = 2e-05
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Frame = +2
Query: 2 HEEGYGFVHFET----EEAANKSIEKVNGMLLNGKKVY----VGRFIPRKEREKELGEKA 157
H G+GFV F + E A N K+ G ++ K+ + IP E +
Sbjct: 109 HSRGFGFVTFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGC 168
Query: 158 KLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERA 337
KL N S + L+ FE +G + +++ G RG GFV +ED ++A+R
Sbjct: 169 KLLLNGITNGV---HSVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRC 221
Query: 338 CMELNGKELVEGKPLYV 388
+G+ +V + + V
Sbjct: 222 LAHNSGRHIVNERKIEV 238
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGISRGFGFVAFEDPDAAERACMEL 349
V+ + G + SDE+L F KY KV+ + S+G+GFV+F D + RA E+
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 350 NGKELVEGKPL 382
+GK V +P+
Sbjct: 265 DGK-YVGNRPI 274
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
+VYV N ++E + + F G + + +++Y ++ G RGF FV F + A+RA +
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 347 LNGKELVEGKPLYVGRAQK 403
LNG G+ L V A K
Sbjct: 67 LNGVAF-NGRNLRVNYANK 84
Score = 33.9 bits (74), Expect = 0.045
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
G+ FV F E A +++E++NG+ NG+ + V
Sbjct: 48 GFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRV 79
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 179 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACMELN 352
V N ++ +++ L+D+F K GR+ + K G+ +GF FV FE D A RA ELN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + +DF D L + F +G I S KV K +S+ FGFV++E+ +A A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 347 LNGKEL 364
+NG ++
Sbjct: 396 MNGFQI 401
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
+GFV +E ++A +I +NG + K++ V
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + +DF D L + F +G I S KV K +S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 347 LNGKEL 364
+NG ++
Sbjct: 560 MNGFQI 565
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 353 GKELVEG 373
+ +EG
Sbjct: 204 HSQTMEG 210
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
+GFV +E ++A +I +NG + K++ V
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + +DF D L + F +G I S KV K +S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 347 LNGKEL 364
+NG ++
Sbjct: 560 MNGFQI 565
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 353 GKELVEG 373
+ +EG
Sbjct: 204 HSQTMEG 210
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
+GFV +E ++A +I +NG + K++ V
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + +DF D L + F +G I S KV K +S+ FGFV++E+ +A A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 347 LNGKEL 364
+NG ++
Sbjct: 489 MNGFQI 494
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 353 GKELVEG 373
+ +EG
Sbjct: 204 HSQTMEG 210
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
+GFV +E ++A +I +NG + K++ V
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKV 501
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + +DF D L + F +G I S KV K +S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 347 LNGKEL 364
+NG ++
Sbjct: 560 MNGFQI 565
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 353 GKELVEG 373
+ +EG
Sbjct: 204 HSQTMEG 210
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 14 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
+GFV +E ++A +I +NG + K++ V
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKV 572
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 43.2 bits (97), Expect = 7e-05
Identities = 20/67 (29%), Positives = 36/67 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 353 GKELVEG 373
+ +EG
Sbjct: 204 HSQTMEG 210
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 43.2 bits (97), Expect = 7e-05
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+ FV F T E ++ + GK V V P K RE + V+V
Sbjct: 71 GFAFVEFTTGEGCKLALA-AREQTIKGKSVEVK---PAKSRENK---------KVFVGGL 117
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERA 337
D+S++ L+ FE++G++ + + K R F F+ FE+ ++A++A
Sbjct: 118 PSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 35.5 bits (78), Expect = 0.015
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACMEL 349
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 350 NGKELVEGKPLYVGRAQ 400
++ ++GK + V A+
Sbjct: 90 -REQTIKGKSVEVKPAK 105
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 43.2 bits (97), Expect = 7e-05
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+ FV F T E ++ + GK V V P K RE + V+V
Sbjct: 71 GFAFVEFTTGEGCKLALA-AREQTIKGKSVEVK---PAKSRENK---------KVFVGGL 117
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERA 337
D+S++ L+ FE++G++ + + K R F F+ FE+ ++A++A
Sbjct: 118 PSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 35.5 bits (78), Expect = 0.015
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACMEL 349
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 350 NGKELVEGKPLYVGRAQ 400
++ ++GK + V A+
Sbjct: 90 -REQTIKGKSVEVKPAK 105
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
+VYV N +++ L + F + G +++ +++ ++ G RGF FV F + AA+RA +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 347 LNGKELVEGKPLYVGRAQ 400
NG + G+ L V AQ
Sbjct: 65 FNGVDF-NGRALRVNLAQ 81
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
G+ FV F E AA +++++ NG+ NG+ + V
Sbjct: 46 GFAFVEFTEEAAAQRAVDQFNGVDFNGRALRV 77
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 41.9 bits (94), Expect = 2e-04
Identities = 30/115 (26%), Positives = 53/115 (46%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
+GY F+ F T + A +++ +NG + G K + E N++V +
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFNLCFANDSYNPNSE-----FNLHVSS 162
Query: 188 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+D +D L +F+KY K+ DG S+G GFV F + + A +E++
Sbjct: 163 VPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEMH 217
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 126
Query: 353 GKEL 364
K+L
Sbjct: 127 PKQL 130
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 127
Query: 353 GKEL 364
K+L
Sbjct: 128 PKQL 131
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 41.1 bits (92), Expect = 3e-04
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGISRGFGFVAFEDPDAAERACME 346
V+++N D +E++K+ K+G+I + YKD G S+G FV F P A C+E
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASN-CIE 322
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.1 bits (92), Expect = 3e-04
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKV-MYKDDGISRGFGFVAFEDPDAAERACMEL 349
+YV F ED ++++L F +G + + + M + G RGFGFV F+ + A A +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 350 NGKELVEGKPLYVGRAQ 400
N EL GK + V A+
Sbjct: 73 NESELF-GKTIRVNFAR 88
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.7 bits (91), Expect = 4e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 353 GKELVE 370
+ +E
Sbjct: 204 HSQTME 209
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+Y+ S++ ++ F YG+I +D + GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI-------RDVLLKNGFGFVEFDDKRDAEDAVHDLN 57
Query: 353 GKEL 364
GKEL
Sbjct: 58 GKEL 61
Score = 31.5 bits (68), Expect = 0.24
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 5 EEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPR 124
+ G+GFV F+ + A ++ +NG L G++V + PR
Sbjct: 35 KNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+Y+ S++ ++ F YG+I +D + GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI-------RDVLLKNGFGFVEFDDKRDAEDAVHDLN 57
Query: 353 GKEL 364
GKEL
Sbjct: 58 GKEL 61
Score = 31.5 bits (68), Expect = 0.24
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 5 EEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPR 124
+ G+GFV F+ + A ++ +NG L G++V + PR
Sbjct: 35 KNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+Y+ S++ ++ F YG+I +D + GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI-------RDVLLKNGFGFVEFDDKRDAEDAVHDLN 57
Query: 353 GKEL 364
GKEL
Sbjct: 58 GKEL 61
Score = 31.5 bits (68), Expect = 0.24
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 5 EEGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPR 124
+ G+GFV F+ + A ++ +NG L G++V + PR
Sbjct: 35 KNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYSKPR 74
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.9 bits (89), Expect = 7e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 353 GKELVEGKPLYV 388
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.9 bits (89), Expect = 7e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 353 GKELVEGKPLYV 388
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.5 bits (88), Expect = 9e-04
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + ++F D L MF +G I S KV + S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 347 LNGKEL 364
+NG ++
Sbjct: 490 MNGFQI 495
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 39.5 bits (88), Expect = 9e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 164 FTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACM 343
+ ++V + S+ L+ FE YG+I +++ + G RG+ F+ + D A
Sbjct: 103 YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYK 162
Query: 344 ELNGKELVEGKPLYV----GRAQK 403
+ +G + V+GK L V GR QK
Sbjct: 163 KADGIK-VDGKRLVVDYERGRTQK 185
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.5 bits (88), Expect = 9e-04
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 170 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAFEDPDAAERACME 346
N+++ + ++F D L MF +G I S KV + S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 347 LNGKEL 364
+NG ++
Sbjct: 490 MNGFQI 495
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
VY+ SD ++ F YG+++ V+ K+ GFGFV F+D A+ A +LN
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKN-----GFGFVDFQDQRDADDAVHDLN 56
Query: 353 GKEL 364
GKEL
Sbjct: 57 GKEL 60
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 5 EEGYGFVHFETEEAANKSIEKVNGMLLNGKKV 100
+ G+GFV F+ + A+ ++ +NG L G++V
Sbjct: 34 KNGFGFVDFQDQRDADDAVHDLNGKELCGERV 65
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGISRGFGFVAFEDPDAAERACM 343
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 344 ELNGKELVEGKPLYVGRAQ 400
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGISRGFGFVAFEDPDAAERACM 343
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 344 ELNGKELVEGKPLYVGRAQ 400
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 38.7 bits (86), Expect = 0.002
Identities = 35/130 (26%), Positives = 61/130 (46%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNF 190
G+ FV + AN + K +G+ KV + P K E + +NV+V+
Sbjct: 52 GFAFVQCRSLAEANVLLAKFSGLFT---KVNFAKKEP-KPAENVMSN----ISNVFVRGI 103
Query: 191 GEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVE 370
D D ++++ +G IT V ++ G+GFV F+ A++ +E++GK L
Sbjct: 104 SRDMPDT---ELYQAFGGITDGVVQCH---VADGYGFVLFDTRANAQKKIVEMDGKTL-N 156
Query: 371 GKPLYVGRAQ 400
GK + V A+
Sbjct: 157 GKLISVSWAR 166
Score = 36.7 bits (81), Expect = 0.006
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIP---RKEREKELGEKA 157
+GYGFV F+T A K I +++G LNGK + V P ++R++ + E++
Sbjct: 130 DGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRKRKRPMSEES 182
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
V+V N + SDE ++ + + G + S K + +G +GFGF F D + RA L+
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILH 108
Query: 353 GKELVEGK 376
L + K
Sbjct: 109 EFHLGDKK 116
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
V+V N + SDE ++ + + G + S K + +G +GFGF F D + RA L+
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILH 108
Query: 353 GKELVEGK 376
L + K
Sbjct: 109 EFHLGDKK 116
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.9 bits (79), Expect = 0.011
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 167 TNVYVKNFG----EDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAER 334
T +Y+ N G + +++ L D F +YG I +V+ + +G F+ F +AAER
Sbjct: 235 TTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE-----KGCAFIEFTTREAAER 289
Query: 335 ACMELNGKELVEGKPLYV 388
A K ++GK L +
Sbjct: 290 AAERSFNKTFIKGKRLTI 307
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 5 EEGYGFVHFETEEAANKSIEK-VNGMLLNGKKVYVGRFIPRKER 133
E+G F+ F T EAA ++ E+ N + GK++ + P+ +R
Sbjct: 273 EKGCAFIEFTTREAAERAAERSFNKTFIKGKRLTIRWGEPQAKR 316
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 35.9 bits (79), Expect = 0.011
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+Y+KN + E + ++F K+G + +V + +RG FV +ED A+ AC L+
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRV--GNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 353 G 355
G
Sbjct: 79 G 79
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 35.9 bits (79), Expect = 0.011
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Frame = +2
Query: 92 KKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSH----- 256
KKV +G KE +LG+K VYV N ED +DE + K G I
Sbjct: 157 KKVGLGAGEDAKEGWLDLGDKVHA---VYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNK 213
Query: 257 ---KVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQ 400
K+ +++G +G G + ++ E AC L+G L G+ + V A+
Sbjct: 214 PKCKLYREENGKLKGDGRCCYIKKESVELACNILDGANL-NGREVKVEEAR 263
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 35.5 bits (78), Expect = 0.015
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = +2
Query: 179 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGISRGFGFVAF---EDPDAA-ERAC- 340
V N +++ L+D+F ++G I ++Y + G SRGFGF+ F ED AA ++ C
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 341 MELNGKEL 364
+L+G ++
Sbjct: 140 TDLDGHKI 147
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.019
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRG-FGFVAFEDPDAAERACMEL 349
+YV NF E+ +E+L+++F + G + KV+ +D S F V FED + A +
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVV--KVILRDVRDSNAKFALVEFEDELSVLFAIELM 72
Query: 350 NGKEL 364
NG L
Sbjct: 73 NGVRL 77
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/64 (20%), Positives = 32/64 (50%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ +++ +K++ +G + + + G S+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 353 GKEL 364
G +L
Sbjct: 353 GMQL 356
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 34.7 bits (76), Expect = 0.026
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 353 GKEL 364
G +
Sbjct: 61 GSRI 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 34.7 bits (76), Expect = 0.026
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 353 GKEL 364
G +
Sbjct: 61 GSRI 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 34.7 bits (76), Expect = 0.026
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 353 GKEL 364
G +
Sbjct: 61 GSRI 64
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/64 (20%), Positives = 32/64 (50%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ +++ +K++ +G + + + G S+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 353 GKEL 364
G +L
Sbjct: 353 GMQL 356
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/64 (20%), Positives = 32/64 (50%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ +++ +K++ +G + + + G S+G+ F + DP ++A LN
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 353 GKEL 364
G +L
Sbjct: 328 GMQL 331
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.026
Identities = 13/64 (20%), Positives = 32/64 (50%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELN 352
+++ +++ +K++ +G + + + G S+G+ F + DP ++A LN
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 353 GKEL 364
G +L
Sbjct: 331 GMQL 334
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 33.9 bits (74), Expect = 0.045
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 191 GEDF--SDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFV 304
G DF +DE + FE G + ++ K DG S+GFGFV
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFV 218
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 32.7 bits (71), Expect = 0.10
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 230 EKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQK 403
E+ + H V +D G +GF +V FE+ A LNG + + L V RAQ+
Sbjct: 34 EELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADF-GNRVLKVNRAQQ 90
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 236 YGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGKPL 382
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 236 YGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGKPL 382
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 236 YGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVEGKPL 382
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.10
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 110 RFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK--DDGI 283
R PR+ AK V +KN + L+++F YG I + + + +
Sbjct: 117 RASPRRSPAARSASPAK---RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHV 173
Query: 284 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYV 388
RG+G+V +++ + AE++ ++G + ++G ++V
Sbjct: 174 HRGYGYVEYDNLEDAEKSIKHMDGGQ-IDGMAVHV 207
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 11 GYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK 127
GYG+V ++ E A KSI+ ++G ++G V+V I R+
Sbjct: 176 GYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQ 214
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.18
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGISRGFGFVAFEDPDAAERACMEL 349
+Y+ S+ + +F +YG + + + + KD G S+GF F+ ++D + A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 350 NGKEL 364
NG L
Sbjct: 100 NGISL 104
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.18
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 182 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKE 361
+ + +DF +E+ +M KYG + V G +V F + AE+A +LN +
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR- 142
Query: 362 LVEGKPLY 385
G+P+Y
Sbjct: 143 WFNGQPIY 150
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 31.1 bits (67), Expect = 0.31
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +2
Query: 161 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERAC 340
L +++ N + + L ++F G+IT +G S+G + + P A +A
Sbjct: 186 LCERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAV 245
Query: 341 MELNGKELVE 370
LNG+ L +
Sbjct: 246 SMLNGQRLFD 255
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 31.1 bits (67), Expect = 0.31
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 221 DMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNG 355
++F +G+I + V Y +GFGFV F + +A+ +C LNG
Sbjct: 102 ELFRPFGKIIA--VNYF---AQQGFGFVQFNEAGSADESCRSLNG 141
Score = 27.9 bits (59), Expect = 2.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 5 EEGYGFVHFETEEAANKSIEKVNGM 79
++G+GFV F +A++S +NGM
Sbjct: 118 QQGFGFVQFNEAGSADESCRSLNGM 142
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 173 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGISRG 292
+++ + ++E L+++F K+G I V+ DG SRG
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 30.3 bits (65), Expect = 0.55
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 32 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDE 211
E+ E K + + G +GK + V R I E +KE EK L + + +F E+F E
Sbjct: 392 ESLEKEYKGVSQEMGTF-SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFME 450
Query: 212 MLK 220
K
Sbjct: 451 YSK 453
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 30.3 bits (65), Expect = 0.55
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 32 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDE 211
E+ E K + + G +GK + V R I E +KE EK L + + +F E+F E
Sbjct: 458 ESLEKEYKGVSQEMGTF-SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFME 516
Query: 212 MLK 220
K
Sbjct: 517 YSK 519
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 30.3 bits (65), Expect = 0.55
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 32 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDE 211
E+ E K + + G +GK + V R I E +KE EK L + + +F E+F E
Sbjct: 333 ESLEKEYKGVSQEMGTF-SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFME 391
Query: 212 MLK 220
K
Sbjct: 392 YSK 394
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 29.9 bits (64), Expect = 0.73
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 8 EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYV 106
+GY V +ET++ AN++I++ N L G+ V V
Sbjct: 96 KGYALVEYETQKEANEAIDQSNDTDLLGQNVKV 128
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 29.9 bits (64), Expect = 0.73
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 107 GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDD 277
G F+P +K L + + +N G+ F+ ML +MF Y + K KDD
Sbjct: 336 GSFVPANFVDKCLTPDGVFISRLVQQNSGDLFTSIMLGEMFSLYRAREAEKAHKKDD 392
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 29.5 bits (63), Expect = 0.96
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 197 DFS---DEMLKDMFEKYGRITSHKVMYKDDGISRG-FGFVAFEDPDAAERACMELN 352
DFS DE + + + G+ +H V+Y+ DG+S G F FE+ E C++++
Sbjct: 902 DFSKEIDERIGEFIDHTGKRPAHIVVYR-DGLSEGDFQKYLFEERVCIEERCLKID 956
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 29.1 bits (62), Expect = 1.3
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -3
Query: 369 STNSLPFNSIHALSAASGSSKATKPKPREIPSSL 268
++N++PF S +++ G+ K T P P +P+++
Sbjct: 615 TSNTIPFGSGSSVAPLFGAPKTTAPPPTTVPATI 648
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.7 bits (61), Expect = 1.7
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 152 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG-ISRGFGFVAFEDPDAA 328
++K+ + V V+ ++ +++ M EK+G + H V DDG I+ F F D A
Sbjct: 606 QSKMSSVVIVRGVTDELVTDLMAHM-EKFGEVFDHSVKADDDGLITAVFPFRKTGDALKA 664
Query: 329 ERACMELNGKEL 364
LNG +L
Sbjct: 665 MADGKVLNGVDL 676
>AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical
protein R09E12.9 protein.
Length = 128
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 203 SDEMLKDMFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDA 325
++ +LK FEKYG++ +V + +G G + +D +A
Sbjct: 9 AEALLKPQFEKYGKLVDDEVWAEVEGYYHPNGVLVHKDKEA 49
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 83 LNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMF 229
L+GKKVY K + +G K +F +VY K G+D + E +F
Sbjct: 148 LDGKKVYKVHL--DKSHQTNVGHKIGVFASVYRKLTGKDVTFEFPDPIF 194
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 366 TNSLPFNSIHALSAASGSSKATKPKPREIPSSLYITL*LVMRPYFSN 226
TN+ P ++ + SK KP P PS+ YI + YF+N
Sbjct: 61 TNAPPNKAVQSFGQCRHCSKPLKPLPTLTPSNRYIHCDSCNKLYFAN 107
>Z70205-10|CAA94122.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 372 PSTNSLPFNSIHALSAASGSSKATKPKPREIPSSLYIT 259
P+ N + HA+S G K+T P P +PS I+
Sbjct: 108 PTQNPVQLPLPHAVSEKPGDKKSTGPTPSPVPSKAPIS 145
>Z68003-5|CAA91979.2| 887|Caenorhabditis elegans Hypothetical
protein E02H4.3a protein.
Length = 887
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 372 PSTNSLPFNSIHALSAASGSSKATKPKPREIPSSLYIT 259
P+ N + HA+S G K+T P P +PS I+
Sbjct: 108 PTQNPVQLPLPHAVSEKPGDKKSTGPTPSPVPSKAPIS 145
>U64604-1|AAF98623.1| 243|Caenorhabditis elegans Hypothetical
protein F49E7.2 protein.
Length = 243
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 224 YLSTFHLKNLLRNFLHKH 171
YLSTF +KNLL+ +H H
Sbjct: 133 YLSTFEMKNLLKIKIHLH 150
>Z68882-6|CAA93107.3| 406|Caenorhabditis elegans Hypothetical
protein C47E12.4c protein.
Length = 406
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 372 PSTNSLPFNSIHALSAASGSSKATKPKPR 286
P TN ++IH S SGSS P PR
Sbjct: 42 PVTNVTQVSAIHTTSMDSGSSTVQLPSPR 70
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 372 PSTNSLPFNSIHALSAASGSSKATKPKPR 286
P TN ++IH S SGSS P PR
Sbjct: 42 PVTNVTQVSAIHTTSMDSGSSTVQLPSPR 70
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 167 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY 268
TNVYV N +++ L F +G + + K++Y
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILY 233
>U13875-13|AAA21156.2| 470|Caenorhabditis elegans Hypothetical
protein C26E6.2 protein.
Length = 470
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 393 RPTYKGFPSTNSLPFNSIHALSAASGSSKATKP--KPREIPSSLY 265
RP+ PS+ + ++ +A S SS +T+P KPR + +Y
Sbjct: 110 RPSASSSPSSTATAVSNSGQSNATSTSSSSTEPEYKPRNVREKVY 154
>AF100305-1|AAC68918.1| 197|Caenorhabditis elegans Hypothetical
protein W04B5.4 protein.
Length = 197
Score = 26.6 bits (56), Expect = 6.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 29 FETEEAANKSIEKVNGMLL---NGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 187
F T A N E + G + N K+ G+ RKE ++L +K L+ +VY +N
Sbjct: 131 FSTSLAPNGQCEVIQGGHVASENDLKLADGKQWTRKELGRDLNKKYHLYQSVYEQN 186
>AC084157-1|AAK68492.2| 185|Caenorhabditis elegans Hypothetical
protein Y46E12BR.1 protein.
Length = 185
Score = 26.6 bits (56), Expect = 6.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 320 QDLQKRQNQNHVKYHHPCTLLCDL*CDHIF-QTYLSTFHLKNLLRNFLHK 174
++L + + +K C L+C L D+ F +LS FH+ NLL F K
Sbjct: 71 KELPLKISAQPIKNSKSC-LICVLLSDNFFILIFLSNFHVPNLLSCFTSK 119
>U55370-7|AAA97998.2| 388|Caenorhabditis elegans Hypothetical
protein K03B4.1 protein.
Length = 388
Score = 26.2 bits (55), Expect = 9.0
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 150 SPNSFSRS--LRGMNLPTYTFFPFSNIPLTFSIDLLAASSVSK*TNPY 13
SP+ F+R+ L +N+ T PF++ F + L +S+ T+P+
Sbjct: 167 SPSYFARAAILEALNIDQSTCIPFTDDSSHFPLTYLVGNSLPAITSPF 214
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 26.2 bits (55), Expect = 9.0
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 53 KSIEKV-NGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMF 229
K+++ + N ++ K + RFI +K L +KA +FT V ++N ++E++ D+F
Sbjct: 338 KTLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPV-LEN-----AEELMTDVF 391
Query: 230 EKY 238
Y
Sbjct: 392 GNY 394
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 26.2 bits (55), Expect = 9.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 209 HLKNLLRNFLHKHW 168
H+K L+ NF+HK W
Sbjct: 450 HIKGLIVNFIHKFW 463
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 32 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFG 193
E E+++ EK NG+ +NG+K + +++++K G+ + N +KN G
Sbjct: 541 EASESSDDEEEKKNGVEVNGQKKPAKK--QQQKKQKADGDDSDDDNNAPMKNIG 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,903,794
Number of Sequences: 27780
Number of extensions: 178470
Number of successful extensions: 862
Number of sequences better than 10.0: 124
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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