Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O24
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              24   0.75 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.75 
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   3.0  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   4.0  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   4.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   9.3  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 110 RFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMF 229
           R +  K R+K +GE      +V    +GE   DE LK  F
Sbjct: 33  REMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYF 72


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 354 PFNSIHALSAASGSSKATKPKP 289
           P +S   LSAA+ SS +T P+P
Sbjct: 823 PASSPRYLSAAATSSTSTSPRP 844


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +2

Query: 8   EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
           EGY F    TE    +  EKV+  L   +    G F P     KE  +K
Sbjct: 115 EGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQK 163


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = +2

Query: 8   EGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 154
           EGY F    TE    +  EKV+  L   +    G F P     KE  +K
Sbjct: 131 EGYPFNPCLTEAQYKEMEEKVSSTLSGLEGELKGTFYPLTGMSKETQQK 179


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 155 PFHPIPFHAPCEE 117
           P  P+P H  CE+
Sbjct: 440 PLPPLPLHTECED 452


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 155 PFHPIPFHAPCEE 117
           P  P+P H  CE+
Sbjct: 440 PLPPLPLHTECED 452


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +2

Query: 224 MFEKYGRITSHKVMYKDDGISRGFGFVAFEDPDAAERACMELNGKELVE 370
           +++ +  +  H+V+Y+         ++ +E+PD  +R     NGK L E
Sbjct: 69  IYQSHHHLHHHQVLYQQSP------YLMYENPDEEKRYQEHPNGKILRE 111


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 107 GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 217
           GR   R ERE+    K     N   KN+  +++ + L
Sbjct: 287 GRSRDRTERERSKETKIISSNNYNYKNYNNNYNSKKL 323


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +2

Query: 107 GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 217
           GR   R ERE+    K     N   KN+  +++ + L
Sbjct: 298 GRSRDRTERERSKETKIISSNNYNYKNYNNNYNSKKL 334


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 152 FHPIPFHAPCEE*IYLHILFFHL 84
           F+ +    PC    YL +L F+L
Sbjct: 237 FYTVNLIVPCVSISYLSVLAFYL 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,042
Number of Sequences: 438
Number of extensions: 2447
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)