Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O21
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 283 4e-77
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 283 4e-77
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 283 4e-77
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 241 2e-64
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 169 6e-43
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 169 6e-43
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 155 1e-38
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 137 4e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 77 8e-15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 77 8e-15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 77 8e-15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 74 6e-14
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 74 6e-14
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 9e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 51 4e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 2e-04
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 41 4e-04
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 35 0.033
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.057
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 32 0.17
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 32 0.17
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 32 0.17
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 30 0.93
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 0.93
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 0.93
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 2.1
AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical ... 29 2.1
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 2.8
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 2.8
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 2.8
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 28 3.7
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 28 3.7
AC199169-12|ABO33253.1| 478|Caenorhabditis elegans Hypothetical... 27 6.5
U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 283 bits (694), Expect = 4e-77
Identities = 132/138 (95%), Positives = 134/138 (97%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGT 406
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQA CAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 407 GEFEAGISKNGQTREHAL 460
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 283 bits (694), Expect = 4e-77
Identities = 132/138 (95%), Positives = 134/138 (97%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGT 406
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQA CAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 407 GEFEAGISKNGQTREHAL 460
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 283 bits (694), Expect = 4e-77
Identities = 132/138 (95%), Positives = 134/138 (97%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGT 406
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQA CAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 407 GEFEAGISKNGQTREHAL 460
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 241 bits (590), Expect = 2e-64
Identities = 112/117 (95%), Positives = 114/117 (97%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVA 397
DKLKAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQA CAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 169 bits (412), Expect = 6e-43
Identities = 77/135 (57%), Positives = 98/135 (72%)
Frame = +2
Query: 56 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKL 235
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA G SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 236 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGEF 415
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQA A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 416 EAGISKNGQTREHAL 460
E G GQT+EHAL
Sbjct: 287 ETGFENGGQTKEHAL 301
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 169 bits (412), Expect = 6e-43
Identities = 77/135 (57%), Positives = 98/135 (72%)
Frame = +2
Query: 56 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKL 235
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA G SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 236 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGEF 415
+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQA A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 416 EAGISKNGQTREHAL 460
E G GQT+EHAL
Sbjct: 305 ETGFENGGQTKEHAL 319
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 155 bits (377), Expect = 1e-38
Identities = 69/137 (50%), Positives = 97/137 (70%)
Frame = +2
Query: 50 GKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLD 229
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 230 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QA AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 410 EFEAGISKNGQTREHAL 460
EFE G + GQTREH++
Sbjct: 224 EFETGFDRGGQTREHSM 240
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 137 bits (331), Expect = 4e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAER 247
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 76.6 bits (180), Expect = 8e-15
Identities = 50/136 (36%), Positives = 67/136 (49%)
Frame = +2
Query: 53 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDK 232
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 233 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGE 412
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 413 FEAGISKNGQTREHAL 460
QTREH L
Sbjct: 150 MP-------QTREHLL 158
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 76.6 bits (180), Expect = 8e-15
Identities = 50/136 (36%), Positives = 67/136 (49%)
Frame = +2
Query: 53 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDK 232
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 233 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGE 412
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 413 FEAGISKNGQTREHAL 460
QTREH L
Sbjct: 151 MP-------QTREHLL 159
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 76.6 bits (180), Expect = 8e-15
Identities = 50/136 (36%), Positives = 67/136 (49%)
Frame = +2
Query: 53 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDK 232
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 233 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGE 412
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 413 FEAGISKNGQTREHAL 460
QTREH L
Sbjct: 151 MP-------QTREHLL 159
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 73.7 bits (173), Expect = 6e-14
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +2
Query: 59 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDK 232
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 233 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGE 412
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 413 FEAGISKNGQTREHAL 460
E QT+EH +
Sbjct: 146 ME-------QTKEHLI 154
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 73.7 bits (173), Expect = 6e-14
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Frame = +2
Query: 59 KVHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDK 232
K+++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 233 LKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGE 412
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ AVL++AA G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 413 FEAGISKNGQTREHAL 460
E QT+EH +
Sbjct: 146 ME-------QTKEHLI 154
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 53.2 bits (122), Expect = 9e-08
Identities = 36/113 (31%), Positives = 51/113 (45%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 251 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
RGIT+ Y + +ID PGH DF + + +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 51.2 bits (117), Expect = 4e-07
Identities = 35/90 (38%), Positives = 45/90 (50%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
NI VI HVD+GK+T T L+Y G I A + G+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 251 RGITIDIALWKFETGKYYVTIIDAPGHRDF 340
RGIT+ A + + + +ID PGH DF
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 50.8 bits (116), Expect = 5e-07
Identities = 37/113 (32%), Positives = 54/113 (47%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
NI + H+DSGK+T T ++Y G ID E ++ +G+ +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM----HEVRGKD-DVGA-----TMDFMDLERQ 95
Query: 251 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
RGITI A + + IID PGH DF + AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 41.9 bits (94), Expect = 2e-04
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQEMGI----GSFKYAWV 223
N+ VI HVD GKST T L+ K G I K +F K+ QE I + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 224 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLI 391
L+K E +G T+++ K + + + +ID+PGH DF + +T + T L+
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDF-SSEVTAALRVTDGALV 139
Query: 392 V 394
V
Sbjct: 140 V 140
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 41.1 bits (92), Expect = 4e-04
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQEMGI----GSFKYAWV 223
N+ VI HVD GKST T L+ K G I K +F K+ QE I + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 224 LDKLKAERERG----ITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLI 391
L+K E +G T+++ K + + + +ID+PGH DF + A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 392 VAAGTG 409
V +G
Sbjct: 141 VDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 34.7 bits (76), Expect = 0.033
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +2
Query: 53 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLD 229
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 230 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIV 394
+ E+ RGIT+ + + +ID+PGH DF + + + A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 34.7 bits (76), Expect = 0.033
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +2
Query: 53 KEKVHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLD 229
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 230 KLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIV 394
+ E+ RGIT+ + + +ID+PGH DF + + + A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 33.9 bits (74), Expect = 0.057
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 GITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
GIT I + E K VT +D PGH F G A VL+VAA G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 32.3 bits (70), Expect = 0.17
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 8/137 (5%)
Frame = +2
Query: 23 IVIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMG 196
+++R P+ ++ + + + V+G D GKST G L C G K I F + E+
Sbjct: 155 VLVRKVPE-SQQFIEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVR 212
Query: 197 IGSFKYAWVLDKLKAERERGITIDIALWKF----ETGKYYVTIIDAPGHRDFIKNMITGT 364
G K + V + + RG ++ A E VT+ID G + K I G
Sbjct: 213 TG--KTSSVCNDVIGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGL 270
Query: 365 SQAT--CAVLIVAAGTG 409
+ T A L+VAA G
Sbjct: 271 TGYTPHFACLVVAADRG 287
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 26 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 133
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 26 VIRD*PKMGKEKVHINIVVIGHVDSGKSTTTGHLIY 133
+IRD P K+ + + V+G+VD+GKST G L +
Sbjct: 128 IIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 325 RSVDDGDIVFAGFELPESNIDGDTTLTLGL 236
R ++DGDIV + F+ P I D T++L L
Sbjct: 260 RFIEDGDIVSSFFDRPSIRIQSDNTVSLRL 289
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.9 bits (64), Expect = 0.93
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYR--AEDADARFTDILFIEKQRGCSI 184
Query: 251 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
+ + I + Y + IID PGH +F M A V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.9 bits (64), Expect = 0.93
Identities = 27/113 (23%), Positives = 46/113 (40%)
Frame = +2
Query: 71 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYR--AEDADARFTDILFIEKQRGCSI 59
Query: 251 RGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
+ + I + Y + IID PGH +F M A V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 68 INIVVIGHVDSGKSTTT 118
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 68 INIVVIGHVDSGKSTTT 118
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 278 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQATCAVLIVAAGTGEFEAGIS 430
++ E G+ V IID+ G RDFI KN+ GT+ A V+ A E +S
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGTADA-FLVVFAADDASSLEEALS 115
>AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AL.3 protein.
Length = 252
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 429 EIPASNSPVPAATISTAHVA*DVPVIMFLMKSLC 328
E+PA+ +PV +S+AH +V +I+F C
Sbjct: 39 EVPATTTPVSLEFVSSAHTTQNVLLIIFAASKEC 72
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERE 250
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 2.8
Identities = 28/107 (26%), Positives = 45/107 (42%)
Frame = +2
Query: 74 IVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVLDKLKAERER 253
I V+GHVD+GK+ I + +++ E IG+ + K + + R
Sbjct: 487 ICVLGHVDTGKTKMLDT-------IRRTNVQQGEAGGITQQIGATEVPAEAIKERCRQVR 539
Query: 254 GITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIV 394
G D + + + IID PGH F G+S A+L+V
Sbjct: 540 GFLQD----QMKIPGFL--IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 218 WVLDKLKAERERGITIDIALWKFETGKYYVTII 316
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 218 WVLDKLKAERERGITIDIALWKFETGKYYVTII 316
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 218 WVLDKLKAERERGITIDIALWKFETGKYYVTII 316
W+++KL R +T W ++ G YVT I
Sbjct: 1443 WLIEKLVTRRNLTVTSPRQPWYYQQGSQYVTTI 1475
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 302 YVTIIDAPGHRDFIKNMITGTSQATCAVLIVA 397
+V+ +D PGH + M+ G + A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>AC199169-12|ABO33253.1| 478|Caenorhabditis elegans Hypothetical
protein F38A1.14 protein.
Length = 478
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 323 PGHRDFIKNMITGTSQATCAVLIVAAGTGEFEAGISKNGQTREHA 457
P + ++ + IT AT A G G F G+S+N T +A
Sbjct: 56 PSYLAYVPDQITANFLATRASHEYGLGFGRFWIGLSRNSSTSPYA 100
>U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical
protein C45G9.8 protein.
Length = 465
Score = 26.6 bits (56), Expect = 8.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +3
Query: 294 ANTMSPSSTLLDTEISS----RT*SLERLKRRAPCLLSPLVLVNSKPVSQRTDK 443
++T+S S+T T+ S R+ ++ KRR+ ++ + NSKPV+ DK
Sbjct: 105 SSTISKSATEKKTKTGSKKVTRSKKSKKTKRRSSTTVTTTTISNSKPVTPDKDK 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,966,375
Number of Sequences: 27780
Number of extensions: 226658
Number of successful extensions: 829
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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