Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O21
(461 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 285 2e-79
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 283 9e-79
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 168 2e-44
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 135 2e-34
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.011
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.69
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 23 2.1
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 23 2.1
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 23 2.1
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 6.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 8.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 285 bits (699), Expect = 2e-79
Identities = 134/138 (97%), Positives = 135/138 (97%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGT 406
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA CAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 407 GEFEAGISKNGQTREHAL 460
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 283 bits (693), Expect = 9e-79
Identities = 133/138 (96%), Positives = 134/138 (97%)
Frame = +2
Query: 47 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGIGSFKYAWVL 226
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMG GSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 227 DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGT 406
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA CAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 407 GEFEAGISKNGQTREHAL 460
GEFEAGISKNGQTREHAL
Sbjct: 121 GEFEAGISKNGQTREHAL 138
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 168 bits (409), Expect = 2e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +2
Query: 218 WVLDKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVA 397
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA CAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 398 AGTGEFEAGISKNGQTREHAL 460
AGTGEFEAGISKNGQTREHAL
Sbjct: 61 AGTGEFEAGISKNGQTREHAL 81
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 135 bits (327), Expect = 2e-34
Identities = 63/65 (96%), Positives = 63/65 (96%)
Frame = +2
Query: 266 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTGEFEAGISKNGQT 445
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQA CAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 446 REHAL 460
REHAL
Sbjct: 61 REHAL 65
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.011
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 305 VTIIDAPGHRDFIKNMITGTSQATCAVLIVAAGTG 409
VT +D PGH FI G VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.69
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 68 INIVVIGHVDSGKST 112
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGI 199
DK+ KFE+EA+++GI
Sbjct: 112 DKKYRVKFEEEAKKLGI 128
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGI 199
DK+ KFE+EA+++GI
Sbjct: 112 DKKFRVKFEEEAKKLGI 128
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.6 bits (46), Expect = 2.1
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 149 DKRTIEKFEKEAQEMGI 199
DK+ KFE+EA+++GI
Sbjct: 112 DKKYRVKFEEEAKKLGI 128
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 223 YPSVFEGTNTHFLG 182
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 20.6 bits (41), Expect = 8.5
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -1
Query: 164 RWYVCRYHRIC 132
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/38 (21%), Positives = 17/38 (44%)
Frame = +1
Query: 277 LEVRNRQILCHHHRRSWTQRFHQEHDHWNVSSDVRRAY 390
L R ++ H R +W + +E +H ++ + Y
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREHQRLTKKMILEY 64
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,900
Number of Sequences: 438
Number of extensions: 3071
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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