Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O19
         (202 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF261918-1|AAF89106.1| 1072|Homo sapiens disintegrin metalloprot...    29   2.8  
BC028730-1|AAH28730.1|  870|Homo sapiens G protein-coupled recep...    28   6.4  
BX537947-1|CAD97915.1|  870|Homo sapiens hypothetical protein pr...    27   8.4  
BC036681-1|AAH36681.1|  263|Homo sapiens GPR155 protein protein.       27   8.4  
BC035037-1|AAH35037.1|  870|Homo sapiens GPR155 protein protein.       27   8.4  
AK091200-1|BAC03609.1|  744|Homo sapiens protein ( Homo sapiens ...    27   8.4  
AK056381-1|BAB71170.1|  693|Homo sapiens protein ( Homo sapiens ...    27   8.4  
AC018470-3|AAY24218.1|  716|Homo sapiens unknown protein.              27   8.4  

>AF261918-1|AAF89106.1| 1072|Homo sapiens disintegrin
            metalloproteinase with thrombospondin repeats protein.
          Length = 1072

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 119  FICFCWHNGGCFVNWSRCRWKACFFP 196
            F C  W +G    +WS  RW+ C+FP
Sbjct: 1051 FPCPQWKSG----DWSEVRWEGCYFP 1072


>BC028730-1|AAH28730.1|  870|Homo sapiens G protein-coupled receptor
           155 protein.
          Length = 870

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 657 RHVLLCLLLIIGLFANLYSCLWWLFNQ 683


>BX537947-1|CAD97915.1|  870|Homo sapiens hypothetical protein
           protein.
          Length = 870

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 657 RHVLLCLLLIIGLFANLSSCLWWLFNQ 683


>BC036681-1|AAH36681.1|  263|Homo sapiens GPR155 protein protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 137 RHVLLCLLLIIGLFANLSSCLWWLFNQ 163


>BC035037-1|AAH35037.1|  870|Homo sapiens GPR155 protein protein.
          Length = 870

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 657 RHVLLCLLLIIGLFANLSSCLWWLFNQ 683


>AK091200-1|BAC03609.1|  744|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33881 fis, clone CTONG2007168. ).
          Length = 744

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 657 RHVLLCLLLIIGLFANLSSCLWWLFNQ 683


>AK056381-1|BAB71170.1|  693|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31819 fis, clone NT2RP6000032. ).
          Length = 693

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 480 RHVLLCLLLIIGLFANLSSCLWWLFNQ 506


>AC018470-3|AAY24218.1|  716|Homo sapiens unknown protein.
          Length = 716

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 79  KHIIYVLIAVIILFYMFLLAQWWLFRQ 159
           +H++  L+ +I LF       WWLF Q
Sbjct: 503 RHVLLCLLLIIGLFANLSSCLWWLFNQ 529


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,107,833
Number of Sequences: 237096
Number of extensions: 471139
Number of successful extensions: 1039
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)