Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O18
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 140 3e-34
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 140 3e-34
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 140 3e-34
AL021474-6|CAI79259.1| 261|Caenorhabditis elegans Hypothetical ... 36 0.008
AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical ... 28 2.0
Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical p... 27 3.5
AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical... 27 3.5
U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome regu... 27 4.6
U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome regu... 27 4.6
AF016444-1|AAN73876.2| 330|Caenorhabditis elegans Serpentine re... 27 4.6
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 27 6.1
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 27 6.1
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 27 6.1
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 27 6.1
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 140 bits (339), Expect = 3e-34
Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Frame = +1
Query: 13 DLITITETMLSGMVKSIHGTYKVKYRPDGPSGEEV-EIDFTPPFARVPMIASLEKILNVR 189
D+I +TE +LS MV SI GTYK++Y P+GP+ E V E+DFTPPF RV M L + L
Sbjct: 270 DVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGAT 329
Query: 190 LPSFDTLDTAESNALLRQLCEKHEVECPPPRTTGRVLDKLVGEFLEDKCINPTLILDHPQ 369
LP TL T E+ + +LC + V+C PRTT R+LDKLVGE+LE I+PT ++ HPQ
Sbjct: 330 LPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHPQ 389
Query: 370 IMSPL 384
IMSPL
Sbjct: 390 IMSPL 394
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 140 bits (339), Expect = 3e-34
Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Frame = +1
Query: 13 DLITITETMLSGMVKSIHGTYKVKYRPDGPSGEEV-EIDFTPPFARVPMIASLEKILNVR 189
D+I +TE +LS MV SI GTYK++Y P+GP+ E V E+DFTPPF RV M L + L
Sbjct: 352 DVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGAT 411
Query: 190 LPSFDTLDTAESNALLRQLCEKHEVECPPPRTTGRVLDKLVGEFLEDKCINPTLILDHPQ 369
LP TL T E+ + +LC + V+C PRTT R+LDKLVGE+LE I+PT ++ HPQ
Sbjct: 412 LPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHPQ 471
Query: 370 IMSPL 384
IMSPL
Sbjct: 472 IMSPL 476
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 140 bits (339), Expect = 3e-34
Identities = 67/125 (53%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Frame = +1
Query: 13 DLITITETMLSGMVKSIHGTYKVKYRPDGPSGEEV-EIDFTPPFARVPMIASLEKILNVR 189
D+I +TE +LS MV SI GTYK++Y P+GP+ E V E+DFTPPF RV M L + L
Sbjct: 328 DVIQLTEDLLSSMVMSIKGTYKIEYHPNGPNTEPVYEVDFTPPFKRVHMYDGLAEKLGAT 387
Query: 190 LPSFDTLDTAESNALLRQLCEKHEVECPPPRTTGRVLDKLVGEFLEDKCINPTLILDHPQ 369
LP TL T E+ + +LC + V+C PRTT R+LDKLVGE+LE I+PT ++ HPQ
Sbjct: 388 LPDPSTLHTEEAREVFDKLCRDNNVDCSAPRTTARLLDKLVGEYLESTFISPTFLIGHPQ 447
Query: 370 IMSPL 384
IMSPL
Sbjct: 448 IMSPL 452
>AL021474-6|CAI79259.1| 261|Caenorhabditis elegans Hypothetical
protein Y32F6A.6 protein.
Length = 261
Score = 36.3 bits (80), Expect = 0.008
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 10 NDLITITETMLSGMVKSIHGTYKVKYRPDGPSGEEVEIDFTPPFARV 150
ND + E +++ +V SI ++ +KYR VEIDFTPPF R+
Sbjct: 180 NDFQDLVEELITTLVYSIKRSFLIKYR-------SVEIDFTPPFKRL 219
>AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical
protein R155.4 protein.
Length = 873
Score = 28.3 bits (60), Expect = 2.0
Identities = 22/63 (34%), Positives = 29/63 (46%)
Frame = -1
Query: 263 TSCFSHNCLRRAFDSAVSSVSKEGNLTFKIFSKLAIIGTLAKGGVKSISTSSPLGPSGRY 84
+SC L A D A + + G+L K+ AII LA G V+ I S S +
Sbjct: 358 SSCEILGSLGVATDQAAKEIMRIGSLATKLSQLSAIISPLA-GKVQDIKIGSLPAESDKN 416
Query: 83 LTL 75
LTL
Sbjct: 417 LTL 419
>Z30423-11|CAD27184.1| 237|Caenorhabditis elegans Hypothetical
protein T20G5.13 protein.
Length = 237
Score = 27.5 bits (58), Expect = 3.5
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -1
Query: 347 VGLMHLSSRNSPTNLSRTRPVVLGGGHST----SCFSHNCLRR-AFDSAVSSV 204
+GLMH S++ RT P V GG+ +C + C RR AF S +
Sbjct: 12 IGLMHCCSQSGGCCKRRTPPPVSCGGNQCQQGYACGQYGCARRKAFGSLTKRI 64
>AL110490-11|CAB54452.1| 620|Caenorhabditis elegans Hypothetical
protein Y48B6A.12 protein.
Length = 620
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -1
Query: 371 ICG*SRINVGLMHLSSRNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSSVSKEG 192
I G + + V + S+R + LS+ R V LG G + + + C+R+ D +S G
Sbjct: 308 IQGTAAVVVAGLLASTRITKKKLSQERIVFLGAGGAATGVAEMCVRQMMDEGLSEEEACG 367
Query: 191 NL 186
+
Sbjct: 368 RI 369
>U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform a
protein.
Length = 668
Score = 27.1 bits (57), Expect = 4.6
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 147 SCKRWSKINFNFFTTGTIWTVFDLVSTMNAFHH 49
+C + + N N+ + T W F+ V+++ HH
Sbjct: 358 TCDDFLRNNLNWVSKATNWNKFNAVASLGLIHH 390
>U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform b
protein.
Length = 965
Score = 27.1 bits (57), Expect = 4.6
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -3
Query: 147 SCKRWSKINFNFFTTGTIWTVFDLVSTMNAFHH 49
+C + + N N+ + T W F+ V+++ HH
Sbjct: 358 TCDDFLRNNLNWVSKATNWNKFNAVASLGLIHH 390
>AF016444-1|AAN73876.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 9 protein.
Length = 330
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = -3
Query: 162 SNHRDSCKRWSKINFNFFTTGTIWTVFDLVSTMNAF 55
S+++D C+ K++ +FF T+ +F L+S++ AF
Sbjct: 2 SSYQDHCQEMEKLSTSFFLRITL--IFQLLSSLVAF 35
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 26.6 bits (56), Expect = 6.1
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = -1
Query: 323 RNSPTNLSRTRPVVLGGGHSTSCFSHNCLRRAFDSAVSS--VSKEGNLTFKIFSKLAIIG 150
R+SP SR V ++ S++ L R ++AV+S +S++ N KI++ LA+
Sbjct: 774 RHSPRMQSRLASV--SNSYNADFLSNDFLTR--NTAVTSHHISEKQN---KIYNALALAS 826
Query: 149 TLAKGGVKSISTSSPLGP 96
+ GG+ S SS L P
Sbjct: 827 VNSMGGLMDTSRSSMLTP 844
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,143,854
Number of Sequences: 27780
Number of extensions: 184439
Number of successful extensions: 539
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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