Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O18
(386 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 0.70
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 0.70
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 0.70
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 0.70
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 2.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 8.6
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 89 SNNYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 322 SNNYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 0.70
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 15 SNHYNRNNVVRNGEKHSW 68
SN+YN NN N KH++
Sbjct: 322 SNNYNYNNNYNNYNKHNY 339
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 2.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 37 MLSGMVKSIHGTYKVKYRPDGPSGEEV 117
+L + K+I+ TY + PDG G +
Sbjct: 466 LLKELSKTINFTYSLALSPDGQFGNYI 492
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 8.6
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3
Query: 126 INFNFFTTGTIWTVF 82
I F +TT IW F
Sbjct: 850 IGFTMYTTCVIWLAF 864
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,403
Number of Sequences: 438
Number of extensions: 2207
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9391092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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