Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O17
(337 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 130 2e-31
03_01_0547 + 4093196-4093657,4094267-4095148 130 2e-31
03_01_0544 + 4082528-4082989,4083585-4084466 130 2e-31
03_01_0543 + 4076981-4077442,4078145-4079026 130 2e-31
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 56 5e-09
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 55 1e-08
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 55 1e-08
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 50 6e-07
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 48 1e-06
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 48 1e-06
02_04_0462 + 23131433-23132836 46 1e-05
10_01_0204 + 2199778-2200835,2201212-2201311 29 0.71
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 29 0.71
05_07_0031 - 27183252-27183317,27183542-27184282 29 1.2
12_01_0346 + 2652181-2653566 28 1.6
02_01_0675 - 5028910-5030379 28 1.6
02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800 28 2.2
01_01_0126 - 1159370-1159657,1161665-1161811,1162832-1162891,116... 28 2.2
12_01_0322 - 2451062-2451601,2451691-2451792,2452237-2452329,245... 27 3.8
04_04_0520 - 25871932-25872074,25872234-25872294,25873267-258733... 27 3.8
01_03_0227 + 13967966-13968559 27 5.0
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 26 6.6
08_02_1175 + 24927153-24927698,24928640-24929185 26 6.6
08_02_0622 + 19422001-19422330,19422411-19422459,19422552-194227... 26 6.6
01_07_0140 - 41387166-41388488 26 6.6
01_06_1058 - 34147025-34147069,34147190-34147339,34147983-341481... 26 6.6
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200... 26 8.7
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 26 8.7
07_03_1008 - 23271680-23273045,23273123-23273568 26 8.7
06_01_0253 + 1896425-1896844 26 8.7
05_01_0060 - 418559-418577,418655-418738,418857-418966,419467-41... 26 8.7
02_05_0171 - 26441007-26441918 26 8.7
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 26 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 130 bits (315), Expect = 2e-31
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +3
Query: 15 GDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIG 194
GDNM+E ST + W+KG L+EALD I P RP+DK LRLPLQDVYKIG
Sbjct: 198 GDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIG 245
Query: 195 PIGTFSVGRVETGILKPGTVVVCAPANITTEVKSVEMYHEALQEAVP 335
IGT VGRVETG+LKPG VV P+ +TTEVKSVEM+HEALQEA+P
Sbjct: 246 GIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALP 292
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 130 bits (315), Expect = 2e-31
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +3
Query: 15 GDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIG 194
GDNM+E ST + W+KG L+EALD I P RP+DK LRLPLQDVYKIG
Sbjct: 198 GDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIG 245
Query: 195 PIGTFSVGRVETGILKPGTVVVCAPANITTEVKSVEMYHEALQEAVP 335
IGT VGRVETG+LKPG VV P+ +TTEVKSVEM+HEALQEA+P
Sbjct: 246 GIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALP 292
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 130 bits (315), Expect = 2e-31
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +3
Query: 15 GDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIG 194
GDNM+E ST + W+KG L+EALD I P RP+DK LRLPLQDVYKIG
Sbjct: 198 GDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIG 245
Query: 195 PIGTFSVGRVETGILKPGTVVVCAPANITTEVKSVEMYHEALQEAVP 335
IGT VGRVETG+LKPG VV P+ +TTEVKSVEM+HEALQEA+P
Sbjct: 246 GIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALP 292
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 130 bits (315), Expect = 2e-31
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +3
Query: 15 GDNMLEPSTKMPWFKGWLVERKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIG 194
GDNM+E ST + W+KG L+EALD I P RP+DK LRLPLQDVYKIG
Sbjct: 198 GDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKIG 245
Query: 195 PIGTFSVGRVETGILKPGTVVVCAPANITTEVKSVEMYHEALQEAVP 335
IGT VGRVETG+LKPG VV P+ +TTEVKSVEM+HEALQEA+P
Sbjct: 246 GIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALP 292
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 56.4 bits (130), Expect = 5e-09
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +3
Query: 93 EGKCLIEALDAILPPARPTDKALRLPLQDVYKIGPIGTFSV-GRVETGILKPGTVVVCAP 269
+G CL++A+D + PP+R K LRLP+ DV+ +G ++ G+VE G + G+ ++ P
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMP 501
Query: 270 ANITTEVKSVE 302
VK++E
Sbjct: 502 FGELAVVKTIE 512
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 93 EGKCLIEALDAILPPARPTDKALRLPLQDVYKIGPIGTFSV-GRVETGILKPGTVVVCAP 269
+G CL++A+D++ P+R K L LP+ DV K G F+ G++ETG ++ G+ V+ +P
Sbjct: 458 QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
Query: 270 ANITTEVKSVE 302
VKS+E
Sbjct: 518 CGEVAAVKSIE 528
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 55.2 bits (127), Expect = 1e-08
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 93 EGKCLIEALDAILPPARPTDKALRLPLQDVYKIGPIGTFSV-GRVETGILKPGTVVVCAP 269
+G CL++A+D++ P+R K L LP+ DV K G F+ G++ETG ++ G+ V+ +P
Sbjct: 458 QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
Query: 270 ANITTEVKSVE 302
VKS+E
Sbjct: 518 CGEVAAVKSIE 528
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 49.6 bits (113), Expect = 6e-07
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +3
Query: 96 GKCLIEALDAILPPARPTDKALRLPLQDVYKIGPIGTFSVGRVETGILKPGTVVVCAPAN 275
G CL E LD I P R +R+P+ D YK +GT +G++E+G + G ++ P
Sbjct: 162 GPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNK 219
Query: 276 ITTEVKSVEMYHEALQEAVP 335
+V SV + ++ A P
Sbjct: 220 ANVKVISVHCDEDRVRSAAP 239
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 48.4 bits (110), Expect = 1e-06
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 93 EGKCLIEALDAILPPARPTDKALRLPLQDVYKIGPIGTFSVGRVETGILKPGTVVVCAPA 272
+G CL E LD I P R +R+P+ D YK +GT +G++E+G ++ G ++ P
Sbjct: 206 DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPN 263
Query: 273 NITTEVKSVEMYHEALQEAVP 335
+V + + ++ A P
Sbjct: 264 KTNVKVIGISLDEHKVRRAGP 284
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 48.4 bits (110), Expect = 1e-06
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Frame = +3
Query: 105 LIEALDAILP-PARPTDKALRLPLQDVYKIGPIGTFSVGRVETGILKPG---TVVVCAPA 272
L++A+D +P P R DK+ +P++DV+ I GT GRVE G +K G ++ P+
Sbjct: 249 LMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPS 308
Query: 273 N-ITTEVKSVEMYHEAL 320
+ T V VEM+ + L
Sbjct: 309 GPLKTTVTGVEMFKKIL 325
>02_04_0462 + 23131433-23132836
Length = 467
Score = 45.6 bits (103), Expect = 1e-05
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 105 LIEALDAILP-PARPTDKALRLPLQDVYKIGPIGTFSVGRVETGILKPGTVVVCAPANIT 281
LI+++D +P P R TD L ++DV+ I GT + GR+E G +K G V T
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRET 319
Query: 282 TE--VKSVEMYHEALQEAV 332
V VEM+ + + +A+
Sbjct: 320 RNCTVTGVEMFQKTMDDAM 338
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 29.5 bits (63), Expect = 0.71
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1
Query: 244 GFRIPVSTLPTENVPIGPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPSLRSTN 65
G RI P+ + I++ S R RRR ++ RAG R+ SRA +R PS S+
Sbjct: 199 GARISFVPCPSVSSVRSAIVF-SARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGV 254
Query: 64 HP 59
HP
Sbjct: 255 HP 256
Score = 27.5 bits (58), Expect = 2.9
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -1
Query: 271 AGAQTTTVPGFRIPVSTLPTENVPIGPILYTSCRGRR-RALSVGRAGGRMASRASIRHLP 95
A A P I V P P L T CRGR R + RAG R+ SRA +R P
Sbjct: 280 ARADVRPSPASSILVGVHP-HRPPSSLSLSTLCRGRGGRESATARAGARV-SRAGVRPSP 337
Query: 94 SA 89
++
Sbjct: 338 AS 339
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 29.5 bits (63), Expect = 0.71
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 172 RGR-RRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHPLNH 50
RGR RA G AGG+ RA I+ LP P+L+ + PL H
Sbjct: 313 RGRPERAGDDGLAGGQGRRRAHIKALPDEIPALKCS--PLYH 352
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 247 PGFRIPVSTLPTENVPIGPILYTSCRGRRRALSVGRAGGRMASRAS 110
P R+P + LP +P G T R RRR+ S R GG A+ A+
Sbjct: 33 PAHRLPPTVLPVVALPAGGDAAT--RDRRRSSSHRRGGGGGAAAAA 76
>12_01_0346 + 2652181-2653566
Length = 461
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 130 RMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNML 20
RMA ++R + P+ + +H L+HG L DG N+L
Sbjct: 201 RMAGLTTVRIIDE--PTAAAVSHGLHHGRLRDGGNVL 235
>02_01_0675 - 5028910-5030379
Length = 489
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 111 EALDAILPPARPTDKALRLPLQDVYKIGPIGTFSVGRVETGI 236
EAL ++ PP+RP +L LP D + P+ VG G+
Sbjct: 39 EALRSLAPPSRPELLSLDLPRYDPARSTPVDLAVVGGGPAGL 80
>02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800
Length = 289
Score = 27.9 bits (59), Expect = 2.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 165 DGEPCQWGEQAEGWRRGP 112
+G+ WG + GWR+GP
Sbjct: 2 EGQQFAWGREEGGWRKGP 19
>01_01_0126 -
1159370-1159657,1161665-1161811,1162832-1162891,
1163021-1163203,1163336-1163569
Length = 303
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 3 SARGGDNMLEPSTKMPWFKGWLVERKEGKAEGK 101
S GG++ EPSTK P+F + V+ + A+G+
Sbjct: 257 SLGGGNDGREPSTKDPFFVWFYVDEEIAVAQGR 289
>12_01_0322 -
2451062-2451601,2451691-2451792,2452237-2452329,
2452443-2452589,2453063-2453150,2453338-2453426,
2453698-2453763,2453962-2454076,2454269-2454462
Length = 477
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 283 VVMLAGAQTTTVPGFRIPVSTLPTENVPIGPI 188
+V L+ +T P +R+P PT N+P P+
Sbjct: 435 MVNLSPRASTPSPSWRLPACLSPTPNLPSSPL 466
>04_04_0520 -
25871932-25872074,25872234-25872294,25873267-25873389,
25873465-25873531,25873710-25873780,25873853-25874004,
25874082-25874158,25874323-25874435,25874503-25874598,
25874703-25874734,25874838-25874884,25875015-25875068,
25875212-25875289,25875607-25875698
Length = 401
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 177 DVYKIGPIGTFSVGRVETGILKPGTVVVCAPAN-ITTEVKSVEMYHE 314
D++ +GP+G + G VE G + P N I E K + MY+E
Sbjct: 38 DIFHLGPLGVWKGGGVE------GVIYDIKPGNAILAEEKHLPMYNE 78
>01_03_0227 + 13967966-13968559
Length = 197
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -1
Query: 268 GAQTTTVPGFRIPVSTLPTENV---PIGPILYTSCR 170
G + +P RIP S LPT ++ P+ P+ +SCR
Sbjct: 129 GMSASHLPEERIPASLLPTFHLLPTPVLPLSTSSCR 164
>11_06_0760 +
27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 102 CLIEALDAILPPARPTDKALRLPLQDVYK 188
C +E + IL + T KAL+LP +DV K
Sbjct: 793 CQLERVANILGGNKRTRKALKLPAEDVKK 821
>08_02_1175 + 24927153-24927698,24928640-24929185
Length = 363
Score = 26.2 bits (55), Expect = 6.6
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Frame = -1
Query: 277 MLAGAQTTTVPGFRIPVSTLPTENVPIGPILYTSCRG----RRRALSVGRAGGRMASRAS 110
M+ ++ TT P ST PIGP+L G RRR S+ AS +S
Sbjct: 78 MMVDSRATTAPPRASAASTSGDTATPIGPVLDDDDDGDIPRRRRLSSLSDFSDEYASTSS 137
Query: 109 IRHLPSAFPSLRSTN--HPLNHG 47
L + LR T P+N G
Sbjct: 138 ---LFLGYTRLRPTRSIRPMNSG 157
>08_02_0622 +
19422001-19422330,19422411-19422459,19422552-19422759,
19422832-19423006,19423101-19423166,19423264-19423377,
19423473-19423589,19423677-19423803,19423893-19424179,
19424279-19424469,19424571-19424656,19424749-19424825,
19425057-19425200
Length = 656
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 63 WLVERKE-GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYK 188
WL E +E KAEG+ I L + P D + L+D+YK
Sbjct: 559 WLTEEEEKAKAEGQSKINFLIIEMSPVIDIDTSGIHALEDLYK 601
>01_07_0140 - 41387166-41388488
Length = 440
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 31 SRPPKCHGSRDGWLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVFPCKTY 183
+RP + G GWL V E + +LL P T ++ PL ++ F C+ +
Sbjct: 93 ARPHRIIGCSHGWLVVVDEACRA-SLLEPFTDGAQV--PLPPVTSFDCEYF 140
>01_06_1058 -
34147025-34147069,34147190-34147339,34147983-34148117,
34148391-34148449,34149142-34149258,34149448-34149625,
34149715-34149798,34150133-34150201,34150385-34150525,
34150781-34150873,34151338-34151466,34152033-34152371,
34152624-34152674
Length = 529
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 197 RADFVYVLQGKTESLVSGASRRKDGVEGLNKAFTFSLSFFTLNQPS 60
R V +G E + +SR K+ +EGL K + L+QPS
Sbjct: 228 RTAIAIVEKGLQEHDAASSSREKEEIEGLRKEVREARRIKMLHQPS 273
>10_08_0301 -
16619499-16619675,16619770-16619853,16619932-16620083,
16620296-16620391,16620473-16620627,16620791-16620856,
16620993-16621062,16621175-16621305,16622121-16622307,
16622410-16622485
Length = 397
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 117 LDAILPPARPTDKALRLPLQDVYKIGP 197
++ I AR +DKAL LPL YK P
Sbjct: 349 IERIHEDARISDKALNLPLYAKYKDSP 375
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 53 PWHFGGRLQHVISASCR 3
PWHF G + V+ AS R
Sbjct: 66 PWHFWGVIAEVVEASAR 82
>07_03_1008 - 23271680-23273045,23273123-23273568
Length = 603
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 171 LQDVYKIGPIGTFSVGRVETGILKPGT 251
L VY+ G + S+G +E I++PGT
Sbjct: 521 LSAVYRQGRVADGSIGPLEIRIVRPGT 547
>06_01_0253 + 1896425-1896844
Length = 139
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 233 TSFNSTYGKCSNRADFVYVLQGKTESLVSGASRRKDGVEG 114
+S +++ G+C+ A V+ G+ S S +R +DG G
Sbjct: 76 SSSSTSQGRCTPLATLYSVVVGRPPSASSYETRNRDGAAG 115
>05_01_0060 -
418559-418577,418655-418738,418857-418966,419467-419577,
419914-419992,420182-420264,420347-420439,420902-421810
Length = 495
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1
Query: 169 GRRRALSVGRAGGRMASRASIRHLPSAFPSLRSTNHPLNHGILVDGSNMLSPPRA 5
G RA + + +S +R LP F SL +T +PL + +L+ + +PP++
Sbjct: 6 GGARATAAAQLLSSSSSPPPLR-LPRRFLSLTATPYPLYYDLLLYRPSYPNPPKS 59
>02_05_0171 - 26441007-26441918
Length = 303
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 75 RKEGKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGPI 200
RK G+A + AL PP L LP Q + GPI
Sbjct: 257 RKRGEAAAASMAMALVPPPPPPAQAPVQLALPAQPWFAAGPI 298
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 237 LKPGTVVVCAPANITTEV 290
LKPG+V++CA IT V
Sbjct: 228 LKPGSVILCADGTITLTV 245
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,664,989
Number of Sequences: 37544
Number of extensions: 223493
Number of successful extensions: 823
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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