Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O16
(400 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 108 3e-25
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 108 3e-25
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 31 0.050
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.087
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 29 0.35
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 29 0.35
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 1.1
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 25 3.3
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 25 4.3
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 5.7
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 24 7.6
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 24 7.6
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 24 7.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 10.0
SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyce... 24 10.0
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 108 bits (260), Expect = 3e-25
Identities = 56/96 (58%), Positives = 71/96 (73%), Gaps = 2/96 (2%)
Frame = +1
Query: 118 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 297
MS +E V AKLAEQAERY++M MK+V + +LS EERNLLSVAYKN++GARR+S
Sbjct: 1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRAS 60
Query: 298 WRVISSIEQKTE--GSERKQQMANEYRVKVEKELRE 399
WR+ISSIEQK E G+ R+ + EYR K+E EL +
Sbjct: 61 WRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSD 96
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 108 bits (260), Expect = 3e-25
Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
Frame = +1
Query: 121 SVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSW 300
+ +E+ V AKLAEQAERY+ M MK V T EL+ EERNLLSVAYKNV+GARR+SW
Sbjct: 3 TTSREDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASW 62
Query: 301 RVISSIEQKTE--GSERKQQMANEYRVKVEKEL 393
R++SSIEQK E G+ + ++ EYR K+E+EL
Sbjct: 63 RIVSSIEQKEESKGNTAQVELIKEYRQKIEQEL 95
>SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 31.5 bits (68), Expect = 0.050
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 121 SVDKEELVQRAKLAEQAERYDDMAAAMKEVT--ETGVELSNEERN-LLSVAYKNVVGARR 291
SV + ++ K ++ E + ++ + +K V+ ET E+SN+E N LL + YK V
Sbjct: 3 SVSNVSVNEQGKFNDKEEGFSNLKS-LKHVSHSETDFEVSNDEDNQLLELGYKPVFKREF 61
Query: 292 SSWRVIS 312
S+W S
Sbjct: 62 STWATFS 68
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 30.7 bits (66), Expect = 0.087
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +1
Query: 127 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSV--AYKNVVGARRSSW 300
+KE+ V K E ++ +A A +++ E+ + +++ + A N+ + S
Sbjct: 925 NKEKSVNNEKFKEVSQA---LAEANEKLNARDEEIERLKVDIIGLQNASLNMQSLKDSDN 981
Query: 301 RVISSIEQKTEGSERKQQMANEYRVKVEKEL 393
R IS +E K + E+K + A+EY + + +EL
Sbjct: 982 RTISDLESKNKELEKKLKEADEYWLLIVEEL 1012
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 28.7 bits (61), Expect = 0.35
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 127 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 306
+K+E QR + Q R D M + +G S+ + SV+ + +R S+
Sbjct: 320 EKQEKEQRLFMLAQKAREDRMG---RNAASSGP--SHAKPRSTSVSSEERSRSRAGSFSH 374
Query: 307 ISSIEQKTEGSE---RKQQMANEYRVKVEKELR 396
S E + E SE R+Q++ E R + EK+LR
Sbjct: 375 HSESENEDEDSEAFRRRQELRRERRRQAEKDLR 407
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 28.7 bits (61), Expect = 0.35
Identities = 22/96 (22%), Positives = 40/96 (41%)
Frame = +1
Query: 112 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARR 291
S S EEL+ R + + Y+ MA + E E ++ + LLS Y N
Sbjct: 3004 SDSSAYGEELM-RERFEHLLKAYEKMALMVAEQEEFNAKIEDMALKLLSEKYDNEAYQAE 3062
Query: 292 SSWRVISSIEQKTEGSERKQQMANEYRVKVEKELRE 399
+R+ + +E+ + EY +E+ L++
Sbjct: 3063 LFYRLSNCVEKVLHNKISITDLKTEYEEILEQTLKK 3098
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 1.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 268 KNVVGARRSSWRVISSIEQKTEGSERKQQMANEYRVKVE 384
KN+ S+ R +SS + K +E + M ++Y K+E
Sbjct: 350 KNLENDEESTLRALSSFQSKIRNAEDEDVMDSQYGSKIE 388
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 25.4 bits (53), Expect = 3.3
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 256 SVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMANEYRVKVEKE 390
S +Y + G S W+ I ++ K+ G +R + Y +KE
Sbjct: 61 SFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKE 105
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 25.0 bits (52), Expect = 4.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 245 ETFFPLLIKMWSAPDGHHGESFPLLNRKP 331
E F P L++ +A D +GE+ LL R+P
Sbjct: 104 EVFLPQLLRYPNASDPLNGEAAALLLREP 132
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 24.6 bits (51), Expect = 5.7
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 340 ERKQQMANEYRVKVEK 387
E++Q AN+YR+KVE+
Sbjct: 85 EQEQNEANDYRLKVER 100
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 24.2 bits (50), Expect = 7.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 198 DEGSDGNRRRAQQRRKKPSFRCL*KCGRRPTVIMAS 305
DEG ++ Q ++KKPS R + GR+P+ + +S
Sbjct: 108 DEGKAIAPKKKQTKQKKPSVRG--RRGRKPSSLSSS 141
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.2 bits (50), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 399 FSELLFYFNPIFVCHLLFSFRPFG 328
F+ELL +P+F LFS++ G
Sbjct: 224 FAELLLEESPLFTLSQLFSYKAHG 247
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 24.2 bits (50), Expect = 7.6
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +1
Query: 184 DMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 309
D+A ++K E ++ +E + SV +K++VG + ++ I
Sbjct: 631 DLAESVKSSAEASAKIVSEIIQVPSVYHKHIVGPKGTTLNAI 672
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.8 bits (49), Expect = 10.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 381 YFNPIFVCHLLFSFRPFGFLFNRGNDS 301
YFN VC L+ S RP G LF ND+
Sbjct: 466 YFNNKVVCDLIESKRPPG-LFAAMNDA 491
>SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 23.8 bits (49), Expect = 10.0
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 259 VAYKNVVGARRSSWRVISSIEQKTEGSERKQQ 354
+ Y ++ + +R++S+ EQ+ E +RK Q
Sbjct: 142 IKYPDIEVNAKPRYRIMSAYEQRVEAPDRKFQ 173
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.127 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,609,569
Number of Sequences: 5004
Number of extensions: 29711
Number of successful extensions: 98
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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