Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O16
(400 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 105 1e-23
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 105 1e-23
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 103 5e-23
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 101 2e-22
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 100 8e-22
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 96 8e-21
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 75 2e-14
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 66 7e-12
08_02_1528 + 27666356-27667081 31 0.44
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 29 1.4
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 29 1.8
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 29 1.8
02_01_0167 - 1159231-1159263,1159348-1159419,1159957-1160052,116... 28 2.4
11_06_0284 + 21909758-21913645 27 4.1
06_03_0244 + 18637406-18637511,18637576-18638123 27 5.5
03_05_0615 + 26137785-26138593,26139307-26141368 27 5.5
12_02_0329 + 17585046-17585561 26 9.5
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 26 9.5
06_02_0307 + 14122217-14122459 26 9.5
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 26 9.5
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 26 9.5
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 26 9.5
03_05_0521 + 25160245-25160883 26 9.5
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 105 bits (253), Expect = 1e-23
Identities = 57/99 (57%), Positives = 72/99 (72%), Gaps = 4/99 (4%)
Frame = +1
Query: 109 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 282
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 283 ARRSSWRVISSIEQKTE--GSERKQQMANEYRVKVEKEL 393
ARR+SWR+ISSIEQK E G+E + + EYR K+E EL
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETEL 318
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 105 bits (252), Expect = 1e-23
Identities = 56/99 (56%), Positives = 73/99 (73%), Gaps = 4/99 (4%)
Frame = +1
Query: 109 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 282
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 283 ARRSSWRVISSIEQKTE--GSERKQQMANEYRVKVEKEL 393
ARR+SWR+ISSIEQK E G+E + + +YR K+E EL
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETEL 100
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 103 bits (247), Expect = 5e-23
Identities = 55/94 (58%), Positives = 70/94 (74%), Gaps = 4/94 (4%)
Frame = +1
Query: 124 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 297
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 298 WRVISSIEQKTE--GSERKQQMANEYRVKVEKEL 393
WR++SSIEQK E G+E + EYR K+E EL
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAEL 94
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 101 bits (242), Expect = 2e-22
Identities = 56/98 (57%), Positives = 69/98 (70%), Gaps = 4/98 (4%)
Frame = +1
Query: 112 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 285
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 286 RRSSWRVISSIEQKTE--GSERKQQMANEYRVKVEKEL 393
RR+SWR+ISSIEQK E G+E EYR ++E EL
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETEL 99
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 99.5 bits (237), Expect = 8e-22
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 7/95 (7%)
Frame = +1
Query: 130 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 294
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 295 SWRVISSIEQKTE--GSERKQQMANEYRVKVEKEL 393
SWR++SSIEQK E G+ A YR +VE EL
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAEL 104
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 96.3 bits (229), Expect = 8e-21
Identities = 45/90 (50%), Positives = 62/90 (68%)
Frame = +1
Query: 127 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 306
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 307 ISSIEQKTEGSERKQQMANEYRVKVEKELR 396
+ S+EQK ++ N Y+ KVE ELR
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELR 92
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 75.4 bits (177), Expect = 2e-14
Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Frame = +1
Query: 220 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--NEYRVKVEKEL 393
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 66.5 bits (155), Expect = 7e-12
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +1
Query: 187 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 360
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 361 NEYRVKVEKEL 393
EYR KVE E+
Sbjct: 61 AEYRRKVEAEM 71
>08_02_1528 + 27666356-27667081
Length = 241
Score = 30.7 bits (66), Expect = 0.44
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +1
Query: 97 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 276
QY T V K+ K A + + + E E + + +LLS K +
Sbjct: 124 QYFIRLTKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKI 180
Query: 277 VGARRSSWRVISSIEQKTE-GSERKQQMANEYRV 375
+ S W ++S QKT + +Q A E+ +
Sbjct: 181 TTSNSSKWSLVSKAFQKTRLACQEEQLQALEFAI 214
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 189 GGRDEGSDGNRRRAQQ-RRKKPSFRCL*KCGRRPTVIM 299
G E +DG RRR++Q RR++P R + G RP++ M
Sbjct: 91 GSAAEAADGGRRRSRQGRRRRPQRRR--RRGSRPSLFM 126
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 344 LSDPSVFCSIEEMTRHDDRRAPTTFL*ATERR 249
L+D S CSI ++TR D + A T TER+
Sbjct: 154 LADKSTGCSIRKITRSDKKPAKTRSFVETERK 185
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.7 bits (61), Expect = 1.8
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +1
Query: 124 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 285
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 286 RRSSWRVISSIEQKTEGSERKQQMANEYRVKVEKE 390
+RSS SS + KT E K ++ VK EK+
Sbjct: 310 QRSS----SSNKGKTSSKESKSD--DDQTVKKEKK 338
>02_01_0167 -
1159231-1159263,1159348-1159419,1159957-1160052,
1160248-1160358,1160768-1160800,1160963-1161076
Length = 152
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 242 KETFFPLLIKMWSAPDGHH-GESFPLLNRKPKGRKENNRWQ 361
+E PLL+++++ GHH E F + ++PK + W+
Sbjct: 36 REKTCPLLLRVFTKVGGHHQNEEFAVRGKEPKDEVQIYTWK 76
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.5 bits (58), Expect = 4.1
Identities = 20/88 (22%), Positives = 40/88 (45%)
Frame = +1
Query: 136 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 315
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 316 IEQKTEGSERKQQMANEYRVKVEKELRE 399
E+K +G R+++ E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>06_03_0244 + 18637406-18637511,18637576-18638123
Length = 217
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 38 SFAIC*LITVYPSNKGISEINIFHRPRCPSIR 133
S +C I PS++GIS + I++RP +++
Sbjct: 184 SSRVCGTIQSQPSDEGISTVRIWYRPPSRTVK 215
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 151 AKLAEQAE-RYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWR 303
+KLA AE +Y D+ +E+T ELS+ LL +A + ++ WR
Sbjct: 13 SKLATLAEQKYGDVRRIRREITFLTDELSSMNALLLKLADMEELDSQLKEWR 64
>12_02_0329 + 17585046-17585561
Length = 171
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 189 GGRDEGSDGNRRRAQQRRKKPS 254
GG+ G DG RR ++RR++ S
Sbjct: 139 GGKGGGGDGRWRRGKERRREQS 160
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 97 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 264
Q +PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 326 QSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>06_02_0307 + 14122217-14122459
Length = 80
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 186 HGGRDEGSDGNRRRAQQRR 242
HG DE DG+ RR++QRR
Sbjct: 62 HGIDDEDCDGDGRRSRQRR 80
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 26.2 bits (55), Expect = 9.5
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Frame = +1
Query: 22 REKPKKFCNLLVNYRLPFQQG-HQ*NQYLPSSTMSVD----KEELVQRAKLAEQAERYDD 186
R + C LL R+P H + + S +++ + ++ KL +
Sbjct: 232 RFEQNNLCQLLKTVRIPLNSTLHSGDNFFRSVNYTIEVVCGESFPAEKEKLQSVEAKILT 291
Query: 187 MAAAMKEVTETGVELSN--EERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA 360
A + + E+ N +ERN + +Y N +RSS R + K E +
Sbjct: 292 KRAELSKFETEYREIDNLLKERNEIHASYTNNSPLKRSSSRSKAKSPSKFSKGEEENSQR 351
Query: 361 NEYRVK 378
E +VK
Sbjct: 352 KEKKVK 357
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 26.2 bits (55), Expect = 9.5
Identities = 21/95 (22%), Positives = 44/95 (46%)
Frame = +1
Query: 97 QYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 276
+YL + T ++D + +Q L DD+ A+K V ++RN +S +++N
Sbjct: 253 EYLHAGTENIDDKNAIQSQPLDSILASSDDVNEAVKIVK------GADDRNEISSSHENT 306
Query: 277 VGARRSSWRVISSIEQKTEGSERKQQMANEYRVKV 381
++S + ++ T +E ++ AN +V
Sbjct: 307 DTVDQASHVEVIEHDEHTNAAENDEE-ANRTEAQV 340
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = -2
Query: 252 KVSFFVAELDAGFRHFLHRGRHVIISFSLLSQLGA 148
K+ + E+D ++H+ H+ + V+ SF +++ GA
Sbjct: 274 KLMAMLDEVDRKYKHYYHQMQIVVSSFDMVAGSGA 308
>03_05_0521 + 25160245-25160883
Length = 212
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 192 GRDEGSDGNRRRAQQRRKKP 251
GR G DG R R ++RR+ P
Sbjct: 99 GRGGGGDGGRSRGRERRRLP 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.127 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,668,681
Number of Sequences: 37544
Number of extensions: 205807
Number of successful extensions: 667
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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