Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O16
(400 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 0.97
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 21 3.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 5.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 20 9.1
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 0.97
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 284 PDGHHGESFPLLNRKPKGRKENNRWQTNIG 373
P GHH S PLL G +R + N G
Sbjct: 516 PSGHHASSAPLLAATLAGGLCPHRRRANSG 545
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 21.4 bits (43), Expect = 3.9
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +1
Query: 82 GHQ*NQYLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETG---VELSNEERNL 252
GH N + S V KEEL KL + E D + ++ VT G + LS +R +
Sbjct: 24 GHDGNLWAKSEGFEVSKEEL---TKLVQGFEEQDILTSS--GVTLAGNRYIYLSGTDRVI 78
Query: 253 LSVAYKNVVGARRSSWRVISSI 318
+ K V +++ V+ S+
Sbjct: 79 RAKLGKVGVHCMKTTQAVVVSL 100
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 5.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 232 LYYFFNLIVPCVLIASMAVLGF 253
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 195 LYYFFNLIVPCVLISSMALLGF 216
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 263 LYYFFNLIVPCVLISSMALLGF 284
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 6.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 390 LLFYFNPIFVCHLLFSFRPFGF 325
L ++FN I C L+ S GF
Sbjct: 263 LYYFFNLIVPCVLISSMALLGF 284
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 20.2 bits (40), Expect = 9.1
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 133 PYRRTSWTMEDIDFTDALVGRVNGN*LANCKTFSVFLLRR 14
PY T + + +VG V GN L F V LRR
Sbjct: 35 PYTVTQAILIALVLGSIIVGTVIGNILVCVAVFLVRKLRR 74
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.127 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,710
Number of Sequences: 438
Number of extensions: 2091
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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