Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O15
(231 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 32 0.048
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 32 0.048
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 32 0.048
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 32 0.048
Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical p... 26 3.1
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 26 3.1
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 26 3.1
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 26 3.1
AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical ... 26 3.1
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 26 4.1
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical pr... 25 5.5
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 32.3 bits (70), Expect = 0.048
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 170 QLCVVCTDNPKEIILLPCGH 229
+LC +C DN K I + PCGH
Sbjct: 388 ELCKICDDNEKNIKIEPCGH 407
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 32.3 bits (70), Expect = 0.048
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 170 QLCVVCTDNPKEIILLPCGH 229
+LC +C DN K I + PCGH
Sbjct: 388 ELCKICDDNEKNIKIEPCGH 407
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 32.3 bits (70), Expect = 0.048
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 170 QLCVVCTDNPKEIILLPCGH 229
+LC +C DN K I + PCGH
Sbjct: 371 ELCKICDDNEKNIKIEPCGH 390
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 32.3 bits (70), Expect = 0.048
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 170 QLCVVCTDNPKEIILLPCGH 229
+LC +C DN K I + PCGH
Sbjct: 371 ELCKICDDNEKNIKIEPCGH 390
>Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 187 ADDAKL*VRKCMIPGVCPPLAATRGELLLQGFVEGASLSLPQDLYAIRQDMT 32
A++AKL V K G+ T E L Q F+E S P++++ I QD++
Sbjct: 359 AEEAKLVVEKNQENGI----ELTLDEALKQIFIEPVPQSSPENVFWIYQDLS 406
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 26.2 bits (55), Expect = 3.1
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +2
Query: 176 CVVCTDNPKEIILLPCGH 229
C++C + ++ ++LPC H
Sbjct: 269 CIICLSDIRDTVILPCRH 286
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 26.2 bits (55), Expect = 3.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 176 CVVCTDNPKEIILLPCGH 229
C +C D P +L CGH
Sbjct: 386 CTICMDAPVNSVLYTCGH 403
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 26.2 bits (55), Expect = 3.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 176 CVVCTDNPKEIILLPCGH 229
C +C D P +L CGH
Sbjct: 566 CTICMDAPVNSVLYTCGH 583
>AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 187 ADDAKL*VRKCMIPGVCPPLAATRGELLLQGFVEGASLSLPQDLYAIRQDMT 32
A++AKL V K G+ T E L Q F+E S P++++ I QD++
Sbjct: 359 AEEAKLVVEKNQENGI----ELTLDEALKQIFIEPVPQSSPENVFWIYQDLS 406
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 158 LPDLQLCVVCTDNPKEIILLPCGH 229
+ L C +C D K+ LLPC H
Sbjct: 37 IEQLLTCPICLDRYKQPKLLPCQH 60
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 158 LPDLQLCVVCTDNPKEIILLPCGH 229
+ L C +C D K+ LLPC H
Sbjct: 37 IEQLLTCPICLDRYKQPKLLPCQH 60
>Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical
protein T16H12.4 protein.
Length = 376
Score = 25.4 bits (53), Expect = 5.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 50 DTTRHDSRHTCPSC 9
DT H+S H CP C
Sbjct: 362 DTLLHESLHVCPGC 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,122,296
Number of Sequences: 27780
Number of extensions: 50015
Number of successful extensions: 154
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 12,740,198
effective HSP length: 56
effective length of database: 11,184,518
effective search space used: 223690360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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