Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O15
         (231 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    24   0.21 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   4.6  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    19   6.1  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    19   6.1  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    19   6.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   8.0  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.2 bits (50), Expect = 0.21
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 94  FVEGASLSLPQDLYAIRQDMTAATRAPRAE 5
           ++ GASL +  D+Y   Q  T     PR +
Sbjct: 52  YIPGASLPIDVDVYNTEQQSTVFVAIPRIQ 81


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 148 PGVCPPLAATRGELLLQ 98
           PG+C  +  T+G  LL+
Sbjct: 497 PGLCDAMKPTKGTELLK 513


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 176 CVVCTDNPKEII 211
           C  CTD  +E+I
Sbjct: 76  CKKCTDKQREVI 87


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 176 CVVCTDNPKEII 211
           C  CTD  +E+I
Sbjct: 76  CKKCTDKQREVI 87


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 176 CVVCTDNPKEII 211
           C  CTD  +E+I
Sbjct: 76  CKKCTDKQREVI 87


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 10/33 (30%), Positives = 12/33 (36%)
 Frame = +3

Query: 45  RIAYKSCGSESDAPSTKXXXXXXXXVAARGGQT 143
           RIA     S S +P  K            GG+T
Sbjct: 516 RIASAPSSSTSSSPPAKGAAAAGQPSKRNGGET 548


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,962
Number of Sequences: 438
Number of extensions: 526
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3785850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)