Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O14
(394 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0457 - 3506709-3506717,3507386-3507484,3507701-3508034,350... 31 0.33
10_07_0186 - 13912973-13913015,13913467-13913773,13913983-139140... 29 1.0
12_01_0795 - 7288235-7288300,7288367-7288443,7288789-7290760 29 1.8
09_03_0013 - 11522505-11522901,11522993-11523182,11523513-115235... 29 1.8
09_03_0007 - 11430123-11430513,11430605-11430794,11431114-114311... 29 1.8
08_02_0925 - 22668875-22668889,22668942-22669018,22669383-226695... 28 2.3
08_02_0272 + 15189617-15190276,15190361-15191107 28 3.1
06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 28 3.1
11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960 27 4.1
11_01_0601 + 4783354-4783691,4784037-4784151,4784202-4784315 27 4.1
04_04_1660 - 35140641-35141894 27 4.1
01_01_0361 + 2838979-2841745,2841897-2842285 27 4.1
11_01_0649 - 5259038-5259195,5259824-5259887,5260446-5260512,526... 27 5.4
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 27 5.4
12_01_0991 - 10057736-10058249,10058412-10059241,10059266-100606... 27 7.1
11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,458... 27 7.1
02_04_0517 - 23599154-23600089 27 7.1
11_06_0095 - 20030237-20031711,20031731-20033057 26 9.4
06_03_0117 + 16826133-16826600,16826650-16827201,16827310-168274... 26 9.4
06_01_0117 + 912780-912959,913754-913828,914059-914112,914848-91... 26 9.4
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 26 9.4
01_01_1016 - 8031876-8032008,8032129-8032253,8032659-8032728,803... 26 9.4
01_01_0866 - 6765761-6766413,6766805-6766906,6767693-6768965 26 9.4
>03_01_0457 -
3506709-3506717,3507386-3507484,3507701-3508034,
3508241-3508443,3508519-3508632,3508707-3508817,
3508907-3509016,3509132-3509241,3509450-3509628,
3509746-3509907,3509996-3510114,3510336-3510423,
3510520-3510625,3510769-3510857,3511211-3511354,
3511459-3511518,3511534-3511656,3511745-3511811,
3511941-3512053,3512140-3512235,3512651-3512818
Length = 867
Score = 31.1 bits (67), Expect = 0.33
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -2
Query: 390 STSLALPFASVNAPCKTVWITREDIAGNQLEGSGKPHSHVQSCHFLGCKGFPSRWFSSLK 211
S+ +AL +V+ C V +I Q+E G+P H H L C P + S++K
Sbjct: 746 SSKIALAKRTVSGVCADVSEYHPNIKNWQIESYGEPEFHTAKVH-LKCA--PGQTISAIK 802
Query: 210 FDGFALNCST 181
F F T
Sbjct: 803 FASFGTPLGT 812
>10_07_0186 -
13912973-13913015,13913467-13913773,13913983-13914043,
13914124-13914299,13914393-13914450,13914709-13914776,
13915591-13915666,13916523-13916627,13916711-13916768,
13916874-13917031
Length = 369
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 293 RGSHIPMCKVAISWVAKAFLHGGFL 219
RG+ P V +SW +AFLH GFL
Sbjct: 37 RGAFDPSRVVQLSWRPRAFLHKGFL 61
>12_01_0795 - 7288235-7288300,7288367-7288443,7288789-7290760
Length = 704
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -2
Query: 393 WSTSLALPFASVNAPCKTVWITREDIAGNQLEGSGKPHSHVQSCHFLGCKGFPSRW 226
WS +A ++ +N P + VW+ RE IA S + +C LGC RW
Sbjct: 345 WSCMIAA-YSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDL-GRW 398
>09_03_0013 -
11522505-11522901,11522993-11523182,11523513-11523581,
11523983-11524109,11524229-11524491,11524597-11524751,
11524906-11524983,11527737-11527808,11527888-11528026,
11528674-11529103
Length = 639
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 152 AXLLQILQYSIRGVTPDHRVSEGNAGEHTNFAMRCR 45
A L + +Y RG DH + GE+ N+AMR R
Sbjct: 402 AHLALVYEYMSRGNLFDHLRGKSGVGENLNWAMRVR 437
>09_03_0007 -
11430123-11430513,11430605-11430794,11431114-11431182,
11431601-11431727,11431843-11432083,11432519-11432596,
11433004-11433109,11433560-11433625,11437021-11437043,
11438106-11438177,11438256-11438394,11439505-11439919
Length = 638
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 152 AXLLQILQYSIRGVTPDHRVSEGNAGEHTNFAMRCR 45
A L + +Y RG DH + GE+ N+AMR R
Sbjct: 403 AHLALVYEYMSRGNLFDHLRGKSGVGENLNWAMRVR 438
>08_02_0925 -
22668875-22668889,22668942-22669018,22669383-22669500,
22669662-22669685,22670067-22670360,22670456-22670563,
22671098-22671946
Length = 494
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +2
Query: 263 QLCTWEC---GFPEPSNWLPAMSSRVIQTV 343
Q CTW FP WLP ++++ +QT+
Sbjct: 96 QFCTWGIRADAFPHIDEWLPLLAAKGVQTL 125
>08_02_0272 + 15189617-15190276,15190361-15191107
Length = 468
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 24 FASNSPTPTPHGEVCVFACVALAHTMVRRDAPNTILQ 134
+A+N P + HGE+ VF V M+ P +LQ
Sbjct: 170 YAANDPVFSRHGELYVFPYVRRDMLMIENQLPLLVLQ 206
>06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991
Length = 276
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 134 RSGEAX--PSDFQRKTIPVEQFNANPSNFKEENH 229
RSG P DFQ K P QF +PS + ++H
Sbjct: 94 RSGSVASDPGDFQSKFAPPPQFRPSPSPSQYDHH 127
>11_01_0635 - 5091381-5091562,5092800-5092866,5093079-5093960
Length = 376
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 295 FGEATFPCAKLPFLGLQRLSFTVVFFFEVRRICVKL 188
F F CAK+ +RLS T +F E+ R+ + +
Sbjct: 176 FQSCKFGCAKISSSSAKRLSITNSYFSEISRVRIAI 211
>11_01_0601 + 4783354-4783691,4784037-4784151,4784202-4784315
Length = 188
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 246 KGFPSRWFSSLKFDGFALNCSTGIVFRWKSLGXASPDL 133
KGFP W + K +N G++ K+LG ++P+L
Sbjct: 117 KGFPYVWNPANKMAD--VNALVGVILTLKALGSSAPEL 152
>04_04_1660 - 35140641-35141894
Length = 417
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 363 SVNAPCKTVWITREDIAGNQLEGSGKPHSHVQSC 262
+++APC TV I R D+A + + +G+ ++ C
Sbjct: 297 AIDAPCSTVLILRLDLATMEWDEAGRMPPNMYRC 330
>01_01_0361 + 2838979-2841745,2841897-2842285
Length = 1051
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = -2
Query: 333 ITREDIAGNQLEGSGKPHSHVQSCHFLGCKGFPSRWFSSLK 211
+T +AGN G P H+ C + RW SLK
Sbjct: 639 LTYASVAGNDNLCGGIPQLHLAPCPIIDASKNNKRWHKSLK 679
>11_01_0649 -
5259038-5259195,5259824-5259887,5260446-5260512,
5260534-5260607,5260725-5261510,5262623-5262685
Length = 403
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 295 FGEATFPCAKLPFLGLQRLSFTVVFFFEVRRICVKL 188
F F CAK+ +RLS T +F E RI + +
Sbjct: 165 FESCKFDCAKISSSSAKRLSITNSYFSETSRIRIAI 200
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 194 NANPSNFKEENHREGKPLQPKKWQLCTWECGFPEPSNW 307
+A+PS +++ N E + P+++Q C+ C P +W
Sbjct: 723 DAHPSIYRKRNLTEDERRSPERYQDCSHWCLPGVPDSW 760
>12_01_0991 -
10057736-10058249,10058412-10059241,10059266-10060633,
10061785-10062327,10066274-10066498,10066590-10066640
Length = 1176
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 198 QIRRTSKKKTTVKESLCNPRNGNFAH 275
Q+R T K++TT++ + P N H
Sbjct: 12 QLRETQKQETTIRAHILKPNTSNHHH 37
>11_01_0574 +
4582098-4582331,4582450-4582492,4582683-4582757,
4584344-4584465,4584547-4584654,4585975-4586119,
4586786-4586869,4586997-4587345,4587527-4587666,
4587784-4588037,4588409-4588576,4588686-4588976,
4589329-4589538,4589778-4589860,4590288-4590414,
4593624-4595516,4596274-4596395,4596487-4596628,
4596719-4596940,4597489-4597563,4598351-4598452,
4598616-4598819
Length = 1730
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = -1
Query: 379 SFTVCVGQRTL*DCLDNSRRHCWQPIGRFGEATFPCAKLPFLGLQRLSFTVVFFFEVRRI 200
S + V + CL+ C+Q +G + C ++PF G + F V + E R+
Sbjct: 559 SHSTAVSTHWIRSCLEEG---CFQDVGSHPIFSPLCCRIPFPGFEDFRFCVSQYEEKDRL 615
Query: 199 CVK 191
+K
Sbjct: 616 LLK 618
>02_04_0517 - 23599154-23600089
Length = 311
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 214 EVRRICVKLFHWNRLSLEITGRCFSRSCNIVL 119
E+ ++ + HW R +E+ GR SRS N L
Sbjct: 77 EINKLLRERGHWERRIVELGGRDHSRSSNAPL 108
>11_06_0095 - 20030237-20031711,20031731-20033057
Length = 933
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1
Query: 82 LPSLTRWSGVTPLIL 126
LPSL+RWS +T L+L
Sbjct: 808 LPSLSRWSNLTDLLL 822
>06_03_0117 +
16826133-16826600,16826650-16827201,16827310-16827453,
16827543-16827959
Length = 526
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 268 LHMGMWLPRTFQLVASNVFASYPDS 342
LH+ M L T ++V NVF+S PD+
Sbjct: 9 LHL-MGLDETMKMVTKNVFSSLPDA 32
>06_01_0117 +
912780-912959,913754-913828,914059-914112,914848-914913,
915137-915241,915454-915570,915827-915927,916012-916058,
916664-916735,916828-916983,917139-917368,917472-917511,
917603-917736,917830-917931,918726-918770,919129-919206,
919225-919365,919447-919542,919732-919833,920185-920283
Length = 679
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -2
Query: 294 SGKPHSHVQSCHFLGCKGFPSRWFSSLKFDGF--ALNCSTGI 175
+G+P + VQ + KG+ +FSS ++ LNC G+
Sbjct: 285 NGRPRTQVQHLMQIDLKGWGVNYFSSFQYYSLLQMLNCVAGL 326
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 69 VFACVALAHTMVRRDAPNTILQDLEKXRPVISNERRFQWNNL 194
+FA ALA + R IL +LE+ ++ F +N L
Sbjct: 538 IFALAALAGHFIWRQKKRKILLELEELYNIVGRPNVFSYNEL 579
>01_01_1016 -
8031876-8032008,8032129-8032253,8032659-8032728,
8032815-8034022
Length = 511
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 226 PP*RKAFATQEMATLHMGM--WLPRTFQLVASNVFASYPD 339
PP R+++ + +H GM W+ +F L+ +VFA+ PD
Sbjct: 191 PPGRRSWCGDGVI-VHAGMLWWVDLSFGLLTCDVFAAKPD 229
>01_01_0866 - 6765761-6766413,6766805-6766906,6767693-6768965
Length = 675
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 258 NGNFAHGNVASPNLPIGCQQ--CLRELSRQS 344
NG F HGN+ + N+ + QQ C+ +L S
Sbjct: 492 NGKFVHGNIKASNVFLNNQQYGCVSDLGLAS 522
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,974,829
Number of Sequences: 37544
Number of extensions: 292615
Number of successful extensions: 912
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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