Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O14
(394 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 29 4.1
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 29 4.1
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 29 4.1
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 29 4.1
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 29 4.1
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 29 4.1
U44060-1|AAC50656.1| 736|Homo sapiens homeodomain protein protein. 29 5.5
BC024201-1|AAH24201.1| 737|Homo sapiens prospero-related homeob... 29 5.5
AL606537-1|CAI15309.1| 745|Homo sapiens prospero homeobox 1 pro... 29 5.5
BC142996-1|AAI42997.1| 624|Homo sapiens ZNF30 protein protein. 29 7.2
AK128593-1|BAC87518.1| 123|Homo sapiens protein ( Homo sapiens ... 29 7.2
AF103279-1|AAD30839.1| 121|Homo sapiens immunoglobulin heavy ch... 29 7.2
BC114503-1|AAI14504.1| 472|Homo sapiens zinc finger, imprinted ... 28 9.5
BC114446-1|AAI14447.1| 472|Homo sapiens zinc finger, imprinted ... 28 9.5
BC069071-1|AAH69071.1| 472|Homo sapiens zinc finger, imprinted ... 28 9.5
BC002701-1|AAH02701.1| 667|Homo sapiens ASCIZ protein protein. 28 9.5
AL135783-2|CAI42900.1| 75|Homo sapiens novel protein protein. 28 9.5
AF365931-1|AAL11635.1| 472|Homo sapiens Kruppel-type zinc-finge... 28 9.5
AB007891-1|BAA24861.2| 719|Homo sapiens KIAA0431 protein. 28 9.5
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 78 RRTHKLRHAVSESASSKRSPGLPRAE 1
R+TH RHA S+S SP PR E
Sbjct: 100 RKTHVTRHAYEGSSSGNSSPEYPRKE 125
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 78 RRTHKLRHAVSESASSKRSPGLPRAE 1
R+TH RHA S+S SP PR E
Sbjct: 135 RKTHVTRHAYEGSSSGNSSPEYPRKE 160
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 78 RRTHKLRHAVSESASSKRSPGLPRAE 1
R+TH RHA S+S SP PR E
Sbjct: 100 RKTHVTRHAYEGSSSGNSSPEYPRKE 125
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 78 RRTHKLRHAVSESASSKRSPGLPRAE 1
R+TH RHA S+S SP PR E
Sbjct: 100 RKTHVTRHAYEGSSSGNSSPEYPRKE 125
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 78 RRTHKLRHAVSESASSKRSPGLPRAE 1
R+TH RHA S+S SP PR E
Sbjct: 100 RKTHVTRHAYEGSSSGNSSPEYPRKE 125
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 78 RRTHKLRHAVSESASSKRSPGLPRAE 1
R+TH RHA S+S SP PR E
Sbjct: 100 RKTHVTRHAYEGSSSGNSSPEYPRKE 125
>U44060-1|AAC50656.1| 736|Homo sapiens homeodomain protein protein.
Length = 736
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 7 TRQTWTSLRTRRLRHRMAKFVCSPALPSLT 96
TR T TSLRT+ H ++ CSPA P T
Sbjct: 517 TRDT-TSLRTKMSSHHLSHHPCSPAHPPST 545
>BC024201-1|AAH24201.1| 737|Homo sapiens prospero-related homeobox
1 protein.
Length = 737
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 7 TRQTWTSLRTRRLRHRMAKFVCSPALPSLT 96
TR T TSLRT+ H ++ CSPA P T
Sbjct: 518 TRDT-TSLRTKMSSHHLSHHPCSPAHPPST 546
>AL606537-1|CAI15309.1| 745|Homo sapiens prospero homeobox 1
protein.
Length = 745
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 7 TRQTWTSLRTRRLRHRMAKFVCSPALPSLT 96
TR T TSLRT+ H ++ CSPA P T
Sbjct: 518 TRDT-TSLRTKMSSHHLSHHPCSPAHPPST 546
>BC142996-1|AAI42997.1| 624|Homo sapiens ZNF30 protein protein.
Length = 624
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 270 AHGNVASPNLPIGCQQCLRELSRQSYRVR 356
AH + + P GC++C R SR SY V+
Sbjct: 362 AHQRIHAEIKPYGCKECGRTFSRASYLVQ 390
>AK128593-1|BAC87518.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ46752 fis, clone TRACH3023063. ).
Length = 123
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 262 PFLGLQRLSFTVVFFFEVRRICVKLFHWNRL 170
PF F+ FFF + ICV++F W +
Sbjct: 9 PFNSWWTFGFSNFFFFTIMNICVQVFVWTNV 39
>AF103279-1|AAD30839.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 44 SDTAWRSLCVRLRCPRSHDGPA*RP*YYIARSGEAXPSDFQRKTIPVEQFNAN 202
+DT+ ++ + LR RS D YY AR G A PSD + V F+A+
Sbjct: 63 TDTSATTVYMELRSLRSEDTAI----YYCARGGIATPSDLWGQGTQVTVFSAS 111
>BC114503-1|AAI14504.1| 472|Homo sapiens zinc finger, imprinted 3
protein.
Length = 472
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 177 FQWNNLTQIRRTSKKKTTVKESLCNP---RNGNFA-HGNVASPNLPIGCQQCLRELSRQS 344
FQ +NL ++T + T + S C R N + H + P GC +C + + +S
Sbjct: 401 FQKSNLHSHQKTHSGERTYRCSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRS 460
Query: 345 YRVR 356
Y VR
Sbjct: 461 YLVR 464
>BC114446-1|AAI14447.1| 472|Homo sapiens zinc finger, imprinted 3
protein.
Length = 472
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 177 FQWNNLTQIRRTSKKKTTVKESLCNP---RNGNFA-HGNVASPNLPIGCQQCLRELSRQS 344
FQ +NL ++T + T + S C R N + H + P GC +C + + +S
Sbjct: 401 FQKSNLHSHQKTHSGERTYRCSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRS 460
Query: 345 YRVR 356
Y VR
Sbjct: 461 YLVR 464
>BC069071-1|AAH69071.1| 472|Homo sapiens zinc finger, imprinted 3
protein.
Length = 472
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 177 FQWNNLTQIRRTSKKKTTVKESLCNP---RNGNFA-HGNVASPNLPIGCQQCLRELSRQS 344
FQ +NL ++T + T + S C R N + H + P GC +C + + +S
Sbjct: 401 FQKSNLHSHQKTHSGERTYRCSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRS 460
Query: 345 YRVR 356
Y VR
Sbjct: 461 YLVR 464
>BC002701-1|AAH02701.1| 667|Homo sapiens ASCIZ protein protein.
Length = 667
Score = 28.3 bits (60), Expect = 9.5
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 87 LAHTMVRRDAPNTILQDLEKXRPVIS 164
+ H+++ ++ P T+ QD+EK P+I+
Sbjct: 386 VTHSLLPQNEPKTLNQDIEKSAPIIN 411
>AL135783-2|CAI42900.1| 75|Homo sapiens novel protein protein.
Length = 75
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 269 CTWECGFPEPSNWLPAMSSR 328
CTW FP+P N A SSR
Sbjct: 14 CTWNVFFPDPENSFRASSSR 33
>AF365931-1|AAL11635.1| 472|Homo sapiens Kruppel-type zinc-finger
protein ZIM3 protein.
Length = 472
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 177 FQWNNLTQIRRTSKKKTTVKESLCNP---RNGNFA-HGNVASPNLPIGCQQCLRELSRQS 344
FQ +NL ++T + T + S C R N + H + P GC +C + + +S
Sbjct: 401 FQKSNLHSHQKTHSGERTYRCSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRS 460
Query: 345 YRVR 356
Y VR
Sbjct: 461 YLVR 464
>AB007891-1|BAA24861.2| 719|Homo sapiens KIAA0431 protein.
Length = 719
Score = 28.3 bits (60), Expect = 9.5
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +3
Query: 87 LAHTMVRRDAPNTILQDLEKXRPVIS 164
+ H+++ ++ P T+ QD+EK P+I+
Sbjct: 438 VTHSLLPQNEPKTLNQDIEKSAPIIN 463
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,892,221
Number of Sequences: 237096
Number of extensions: 1515390
Number of successful extensions: 11622
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11621
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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