Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O14
         (394 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   2.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   2.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   2.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   3.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   8.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   8.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +3

Query: 210 TSKKKTTVKESLCNPRNGNFAHGNVASPNLPIG---CQQCLRELSRQSYRVR 356
           T K+K  +K         +F  G+ A P  P+    CQQC+  L+  + R+R
Sbjct: 513 TLKRKGLIKSE---NEAADFFSGSCA-PGAPLDSKLCQQCVGNLASNNDRIR 560


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +3

Query: 210 TSKKKTTVKESLCNPRNGNFAHGNVASPNLPIG---CQQCLRELSRQSYRVR 356
           T K+K  +K         +F  G+ A P  P+    CQQC+  L+  + R+R
Sbjct: 513 TLKRKGLIKSE---NEAADFFSGSCA-PGAPLDSKLCQQCVGNLASNNDRIR 560


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +3

Query: 210 TSKKKTTVKESLCNPRNGNFAHGNVASPNLPIG---CQQCLRELSRQSYRVR 356
           T K+K  +K         +F  G+ A P  P+    CQQC+  L+  + R+R
Sbjct: 513 TLKRKGLIKSE---NEAADFFSGSCA-PGAPLDSKLCQQCVGNLASNNDRIR 560


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 150 RPVISNERRFQWNNLTQIRRTSKKKTTVKESLCNPRN 260
           R  I+ +RR Q N L      S    TV  S   PR+
Sbjct: 879 RASIAAQRRIQSNGLNDPTTVSLAVDTVARSNVTPRS 915


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +2

Query: 206 SNFKEENHREGKPLQPKKW 262
           +   EEN ++ K   P++W
Sbjct: 426 AGLNEENFKDAKKYLPERW 444


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 70  CSPALPSLTR 99
           CSP+ PS+TR
Sbjct: 333 CSPSNPSITR 342


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 68  TNFAMRCRSRRVRSEVQVCL 9
           T F   CRSRR      +CL
Sbjct: 340 TQFLQVCRSRRHSDSCCLCL 359



 Score = 20.2 bits (40), Expect = 8.8
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = -2

Query: 333 ITREDIAGNQLEGSGKPHSHVQSCHFLGC 247
           + R D+   + EG     S   SC  L C
Sbjct: 303 LERNDLDLEKYEGISSTPSQASSCSCLDC 331


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 189 NLTQIRRTSKKKTTVKESLCNP 254
           NLT ++    KK   K S  NP
Sbjct: 214 NLTMVKLNWPKKRVTKMSSINP 235


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 105 GPSCERGQRRRTHKLRHAVSESASSKRSP 19
           GP     Q +RT  + + +    +S RSP
Sbjct: 713 GPRMTAEQLKRTDIIHNYIMRGEASPRSP 741


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,085
Number of Sequences: 438
Number of extensions: 2866
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9638226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)