Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O13
         (236 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07065-1|AAA16186.1| 1283|Drosophila melanogaster P-glycoprotein...    29   0.87 
AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ...    27   4.6  
AY058448-1|AAL13677.1|  886|Drosophila melanogaster GH23636p pro...    26   6.1  
AE014297-1461|AAF54760.1|  886|Drosophila melanogaster CG4848-PA...    26   6.1  

>L07065-1|AAA16186.1| 1283|Drosophila melanogaster
           P-glycoprotein/multidrug resistanceprotein protein.
          Length = 1283

 Score = 29.1 bits (62), Expect = 0.87
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 104 GFGLTFFGFLIPFYELLFWY 45
           GFGL +F F+   Y L FWY
Sbjct: 303 GFGLLWFFFIYASYALAFWY 322


>AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ,
           isoform J protein.
          Length = 401

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +2

Query: 14  LSEWQSRIYNHTKT--KAHRKELKNRRRSDR 100
           L ++  R +NH +   K H K ++NR R++R
Sbjct: 327 LEKYVPRFFNHARFLYKLHSKSIRNRNRNNR 357


>AY058448-1|AAL13677.1|  886|Drosophila melanogaster GH23636p
           protein.
          Length = 886

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 177 LLGGFKVTFFTEPLVPQDLGSS-QVWI 100
           ++ GFK  F    L P+ LGSS Q W+
Sbjct: 310 IIAGFKPQFDVPQLTPEQLGSSLQQWL 336


>AE014297-1461|AAF54760.1|  886|Drosophila melanogaster CG4848-PA
           protein.
          Length = 886

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 177 LLGGFKVTFFTEPLVPQDLGSS-QVWI 100
           ++ GFK  F    L P+ LGSS Q W+
Sbjct: 310 IIAGFKPQFDVPQLTPEQLGSSLQQWL 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,295,393
Number of Sequences: 53049
Number of extensions: 147627
Number of successful extensions: 407
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)