Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O10
(281 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A pr... 34 0.096
BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A (5... 34 0.096
BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein. 34 0.096
AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A (5... 34 0.096
Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein. 33 0.13
Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein. 33 0.13
EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein. 33 0.13
BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium p... 33 0.13
AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD... 33 0.13
EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein. 31 0.90
BC021144-1|AAH21144.1| 740|Homo sapiens FLJ30092 protein protein. 28 4.8
AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protei... 28 4.8
AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein. 28 4.8
BC113699-1|AAI13700.1| 490|Homo sapiens ribosomal L1 domain con... 28 6.3
BC112228-1|AAI12229.1| 490|Homo sapiens ribosomal L1 domain con... 28 6.3
BC107782-1|AAI07783.1| 464|Homo sapiens RSL1D1 protein protein. 28 6.3
BC019069-1|AAH19069.2| 492|Homo sapiens RSL1D1 protein protein. 28 6.3
BC016362-1|AAH16362.1| 440|Homo sapiens Unknown (protein for IM... 28 6.3
AY598331-1|AAT06742.1| 490|Homo sapiens L12 protein. 28 6.3
AY354203-1|AAQ63888.1| 1013|Homo sapiens RAN-binding protein 2-l... 28 6.3
AY154473-1|AAN46298.1| 490|Homo sapiens cellular senescence inh... 28 6.3
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 28 6.3
AJ007398-1|CAA07491.1| 517|Homo sapiens PBK1 protein protein. 28 6.3
AF083127-1|AAF98239.1| 322|Homo sapiens unknown protein. 28 6.3
>BC104793-1|AAI04794.1| 594|Homo sapiens nucleolar protein 5A
protein.
Length = 594
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 235
+A A+ E + PEE E+ E P KK K EVP+ NG E+
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 498
>BC104791-1|AAI04792.1| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 235
+A A+ E + PEE E+ E P KK K EVP+ NG E+
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 498
>BC004937-1|AAH04937.1| 174|Homo sapiens NOL5A protein protein.
Length = 174
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 235
+A A+ E + PEE E+ E P KK K EVP+ NG E+
Sbjct: 37 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 78
>AL049712-4|CAC01444.2| 594|Homo sapiens nucleolar protein 5A
(56kDa with KKE/D repeat) protein.
Length = 594
Score = 33.9 bits (74), Expect = 0.096
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 235
+A A+ E + PEE E+ E P KK K EVP+ NG E+
Sbjct: 457 LALASSENSSSTPEECE--EMSEKPKKKKKQKPQEVPQENGMED 498
>Y12065-1|CAA72789.1| 602|Homo sapiens hNop56 protein.
Length = 602
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 235
+A A+ E + PEE T E P KK K EVP+ NG E+
Sbjct: 465 LALASSENSSSTPEECEETS--EKPKKKKKQKPQEVPQENGMED 506
>Y00067-1|CAA68276.1| 916|Homo sapiens NF-M protein.
Length = 916
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENGR 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G+
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGK 653
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 110 DAAVEKQDAAPEEVTSTEVKESPIKKSPTK---KTEVPESNGKENGR 241
+ A +++ A +V E +SP+ KSP + K+ VP+S +E G+
Sbjct: 594 EVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGK 640
>EF560736-1|ABQ59046.1| 916|Homo sapiens NEFM protein protein.
Length = 916
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENGR 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G+
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGK 653
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 110 DAAVEKQDAAPEEVTSTEVKESPIKKSPTK---KTEVPESNGKENGR 241
+ A +++ A +V E +SP+ KSP + K+ VP+S +E G+
Sbjct: 594 EVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGK 640
>BC096757-1|AAH96757.1| 916|Homo sapiens neurofilament, medium
polypeptide 150kDa protein.
Length = 916
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENGR 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G+
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGK 653
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 110 DAAVEKQDAAPEEVTSTEVKESPIKKSPTK---KTEVPESNGKENGR 241
+ A +++ A +V E +SP+ KSP + K+ VP+S +E G+
Sbjct: 594 EVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGK 640
>AF181990-1|AAF00492.1| 260|Homo sapiens neurofilament-3 (150 kD
medium) protein.
Length = 260
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKENGR 241
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E G+
Sbjct: 165 VADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGK 216
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +2
Query: 110 DAAVEKQDAAPEEVTSTEVKESPIKKSPTK---KTEVPESNGKENGR 241
+ A +++ A +V E +SP+ KSP + K+ VP+S +E G+
Sbjct: 157 EVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGK 203
>EF560737-1|ABQ59047.1| 877|Homo sapiens NEFM protein protein.
Length = 877
Score = 30.7 bits (66), Expect = 0.90
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Frame = +2
Query: 104 MADAAVEKQDAAPEEVTSTEVKE---SPIKKSPTK---KTEVPESNGKE 232
+ADA VEK + A V + V+E SP+ KSP + K+ VP+S +E
Sbjct: 602 VADAKVEKPEKAKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEE 650
>BC021144-1|AAH21144.1| 740|Homo sapiens FLJ30092 protein protein.
Length = 740
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 122 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 217
+K P+ ++ E +KSPTKK EVPE
Sbjct: 117 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 148
>AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protein
phosphatase protein.
Length = 1381
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 122 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 217
+K P+ ++ E +KSPTKK EVPE
Sbjct: 758 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 789
>AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein.
Length = 3006
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 122 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPE 217
+K P+ ++ E +KSPTKK EVPE
Sbjct: 2383 KKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 2414
>BC113699-1|AAI13700.1| 490|Homo sapiens ribosomal L1 domain
containing 1 protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 314 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 350
>BC112228-1|AAI12229.1| 490|Homo sapiens ribosomal L1 domain
containing 1 protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 314 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 350
>BC107782-1|AAI07783.1| 464|Homo sapiens RSL1D1 protein protein.
Length = 464
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 314 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 350
>BC019069-1|AAH19069.2| 492|Homo sapiens RSL1D1 protein protein.
Length = 492
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 316 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 352
>BC016362-1|AAH16362.1| 440|Homo sapiens Unknown (protein for
IMAGE:4107571) protein.
Length = 440
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 313 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 349
>AY598331-1|AAT06742.1| 490|Homo sapiens L12 protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 314 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 350
>AY354203-1|AAQ63888.1| 1013|Homo sapiens RAN-binding protein 2-like
1 short isoform protein.
Length = 1013
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 125 KQDAAPEEVTSTEVKESPIKKSPTKK 202
++DA + V+S+ V +SP+ SP +K
Sbjct: 504 REDALDDNVSSSSVHDSPLASSPVRK 529
>AY154473-1|AAN46298.1| 490|Homo sapiens cellular senescence
inhibited gene protein protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 314 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 350
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 107 ADAAVEKQDAAPEEVTSTEVKESPIKKSP---TKKTEVP 214
A+ E + AAP +VT K P KK+P KK E+P
Sbjct: 11606 AEVVEEPEPAAPPQVTVPPKKPVPEKKAPAVVAKKPELP 11644
>AJ007398-1|CAA07491.1| 517|Homo sapiens PBK1 protein protein.
Length = 517
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 314 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 350
>AF083127-1|AAF98239.1| 322|Homo sapiens unknown protein.
Length = 322
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 113 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGR 241
+ + K D APE +T +KK +KK + PE K+ GR
Sbjct: 239 SVLSKDDVAPESGDTT------VKKPESKKEQTPEHGKKKRGR 275
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,015,023
Number of Sequences: 237096
Number of extensions: 430579
Number of successful extensions: 1633
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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