Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O05
(341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 221 8e-59
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 221 8e-59
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 221 1e-58
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 221 1e-58
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 221 1e-58
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 221 1e-58
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 221 1e-58
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 221 1e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 221 1e-58
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 221 1e-58
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 205 6e-54
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 141 1e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 136 5e-33
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 95 2e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 65 1e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 51 2e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 3e-05
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.094
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 0.50
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 28 2.0
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 2.7
AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical ... 26 6.1
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 26 8.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 26 8.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 26 8.1
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 26 8.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 221 bits (541), Expect = 8e-59
Identities = 107/108 (99%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (541), Expect = 8e-59
Identities = 107/108 (99%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 82 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 141
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 142 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 189
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 112 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 171
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 172 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 219
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 221 bits (540), Expect = 1e-58
Identities = 106/108 (98%), Positives = 108/108 (100%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRD
Sbjct: 126 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 185
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 233
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 205 bits (501), Expect = 6e-54
Identities = 98/108 (90%), Positives = 103/108 (95%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRD
Sbjct: 125 ETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRD 184
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAS 341
LTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AAS
Sbjct: 185 LTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAAS 232
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 141 bits (341), Expect = 1e-34
Identities = 63/98 (64%), Positives = 80/98 (81%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
ETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRD 188
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 311
+T+YL +L GY F + E EIVR++KE CY+ALD
Sbjct: 189 VTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 136 bits (328), Expect = 5e-33
Identities = 60/102 (58%), Positives = 80/102 (78%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 198 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 323
+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE
Sbjct: 189 ITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQE 230
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 94.7 bits (225), Expect = 2e-20
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 8/110 (7%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAIL 173
E+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I
Sbjct: 139 ESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIK 198
Query: 174 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 323
+ +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 199 HIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 64.9 bits (151), Expect = 1e-11
Identities = 27/72 (37%), Positives = 48/72 (66%)
Frame = +3
Query: 18 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 197
E F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G
Sbjct: 148 EKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDL 207
Query: 198 LTDYLMKILTER 233
+T+ L ++L ++
Sbjct: 208 ITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.8 bits (116), Expect = 2e-07
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +3
Query: 54 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 233
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368
Query: 234 G---YSFTTTAEREIVRDIKEKLCYVALDFEQE 323
Y+F + E+ I+R E+ YV D+++E
Sbjct: 369 NKGLYAFQSPVEKLILRFALEQTTYVPEDYQKE 401
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/80 (26%), Positives = 43/80 (53%)
Frame = +3
Query: 96 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 275
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 276 DIKEKLCYVALDFEQEMATA 335
+ KE LC+V+ +F++ M A
Sbjct: 204 ECKEDLCFVSQNFDESMKEA 223
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/80 (26%), Positives = 43/80 (53%)
Frame = +3
Query: 96 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 275
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 276 DIKEKLCYVALDFEQEMATA 335
+ KE LC+V+ +F++ M A
Sbjct: 204 ECKEDLCFVSQNFDESMKEA 223
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.094
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 121 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 26
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 73 TRPVVPPVS-CWIPAMVYPTQYPSTRVTPYRTPSCV 177
TRP P++ W P +VY Q+P R+ P +P C+
Sbjct: 43 TRPRKSPLNENWKPDVVYLYQFPRARLLPNLSPFCM 78
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/53 (28%), Positives = 19/53 (35%)
Frame = +1
Query: 34 PPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PV 192
PPC P C P PP +P P P+ P P C+ P+
Sbjct: 27 PPCP---EPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPM 76
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 86 YHRYRAGFRRWCIP 127
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
>AL132858-6|CAB60475.1| 412|Caenorhabditis elegans Hypothetical
protein Y113G7A.11 protein.
Length = 412
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 180 PDAGWRAVGRNPRRWVLCGIHHRRNPARYRWYDRT 76
PD + RNP+ + HH RN Y W + T
Sbjct: 160 PDTKYIYCVRNPKDCLTSYFHHNRNFKIYNWANGT 194
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 118 PSPESSTIPVVRPDAYSESTAW 53
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 118 PSPESSTIPVVRPDAYSESTAW 53
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 118 PSPESSTIPVVRPDAYSESTAW 53
P P P+V P +YSES W
Sbjct: 540 PPPAKIHAPMVSPGSYSESEEW 561
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 118 PSPESSTIPVVRPDAYSESTAW 53
P P P+V P +YSES W
Sbjct: 540 PPPAKIHAPMVSPGSYSESEEW 561
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 118 PSPESSTIPVVRPDAYSESTAW 53
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -2
Query: 118 PSPESSTIPVVRPDAYSESTAW 53
P P P+V P +YSES W
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEW 1740
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 25.8 bits (54), Expect = 8.1
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 22 PSTHPPCT*-LSRPCSHCTRPVVPP----VSCWIP-AMVYPTQYPS--TRVTPYRTPSCV 177
P+ P C+ +S CS C+ PVV P VS + P + Y PS + P P+CV
Sbjct: 6 PAIMPCCSLSISYSCSSCSAPVVAPAPVAVSGYQPYGIAYYPVVPSCTAQCMPTCAPTCV 65
Query: 178 WT 183
T
Sbjct: 66 DT 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,341,766
Number of Sequences: 27780
Number of extensions: 174287
Number of successful extensions: 609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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