Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O03
         (189 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   1.8  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   1.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   3.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   4.1  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    19   5.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        19   5.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        19   5.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        19   5.4  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    19   7.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    19   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   7.2  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    18   9.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    18   9.5  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    18   9.5  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    18   9.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    18   9.5  

>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 142 WALLRTVSTMTCI 180
           WAL + +S M CI
Sbjct: 328 WALFKAMSHMLCI 340



 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 131 TDSKICRFLFGGHRA 87
           TD+K+   LFG  +A
Sbjct: 51  TDNKLAMKLFGSKKA 65


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 142 WALLRTVSTMTCI 180
           WAL + +S M CI
Sbjct: 296 WALFKAMSHMLCI 308



 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 131 TDSKICRFLFGGHRA 87
           TD+K+   LFG  +A
Sbjct: 51  TDNKLAMKLFGSKKA 65


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 147  IVKDCVDD 170
            I+KDCV+D
Sbjct: 1306 IIKDCVED 1313


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query: 124 PRS-VDSCSVGI 92
           PRS  DSC VGI
Sbjct: 378 PRSSADSCQVGI 389


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 149 NAQNAATDSKICRFLFGGHRAHRRD 75
           N +N   D++ C   FG     +RD
Sbjct: 133 NLENFPMDTQRCPLQFGSFGYTKRD 157


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 4/8 (50%), Positives = 7/8 (87%)
 Frame = +2

Query: 110 IYRSWNRW 133
           + +SWN+W
Sbjct: 692 VNKSWNKW 699


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 4/8 (50%), Positives = 7/8 (87%)
 Frame = +2

Query: 110 IYRSWNRW 133
           + +SWN+W
Sbjct: 692 VNKSWNKW 699


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 4/8 (50%), Positives = 7/8 (87%)
 Frame = +2

Query: 110 IYRSWNRW 133
           + +SWN+W
Sbjct: 692 VNKSWNKW 699


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 131 TDSKICRFLFGGHRA 87
           TD+K+   LFG  +A
Sbjct: 51  TDNKLAMKLFGSKKA 65


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 120 DL*IPVRWASRAPPR 76
           DL IPVR     PPR
Sbjct: 453 DLAIPVRETLILPPR 467


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 50  GLRGCPTFSRGGARDAH 100
           G+ G P    GG R A+
Sbjct: 575 GVGGVPVVGAGGGRRAY 591


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -1

Query: 105 VRWASRAPPRLKVGQPRKP 49
           + W +  P     GQPR P
Sbjct: 117 LEWNAAHPEEDDGGQPRPP 135


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 35  IERYEGLRGCPT 70
           +E+YEG+   P+
Sbjct: 310 LEKYEGISSTPS 321


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 178 YTSSSTQSLTMPKTLPPIP 122
           YT +   ++   +TLP +P
Sbjct: 57  YTKTFKMNVPFEETLPSLP 75


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 178 YTSSSTQSLTMPKTLPPIP 122
           YT +   ++   +TLP +P
Sbjct: 59  YTKTFKMNVPFEETLPSLP 77


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 65  DNRVNPHIVRSSNPTK 18
           +NR N H++ ++  TK
Sbjct: 274 ENRSNLHVIVNATVTK 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,485
Number of Sequences: 438
Number of extensions: 1069
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)