Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O02
         (111 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   0.45 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   1.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   1.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   5.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   9.8  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 0.45
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +3

Query: 15  PRAGLVSTTSV 47
           PRA LVSTTSV
Sbjct: 740 PRASLVSTTSV 750


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
          receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 65 LSVHQVDTCRRD 30
          + VH +DTC RD
Sbjct: 17 IGVHILDTCGRD 28


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 65  LSVHQVDTCRRD 30
           + VH +DTC RD
Sbjct: 107 IGVHILDTCGRD 118


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 109 PSSIPSPTYQC 77
           P++ PSP  QC
Sbjct: 741 PNASPSPAEQC 751


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 5   GIRAEGWARLDDKC 46
           GIR E     DD+C
Sbjct: 818 GIRPERLPSFDDEC 831


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 5   GIRAEGWARLDDKC 46
           GIR E     DD+C
Sbjct: 856 GIRPERLPSFDDEC 869


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,728
Number of Sequences: 438
Number of extensions: 292
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 17
effective length of database: 138,897
effective search space used:  2639043
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)