Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_O01
(266 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB24D3.03 |||agmatinase |Schizosaccharomyces pombe|chr 1|||Ma... 27 0.59
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 25 2.4
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 25 2.4
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 25 2.4
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 25 2.4
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 2.4
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 24 3.1
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 24 3.1
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 24 3.1
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 24 3.1
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 24 3.1
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 24 3.1
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 24 3.1
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 24 3.1
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 24 3.1
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 24 3.1
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 24 3.1
SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 24 4.1
SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharo... 23 5.5
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 23 5.5
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 23 5.5
SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate syntha... 23 7.2
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 23 7.2
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 23 7.2
SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces pomb... 23 9.6
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 23 9.6
SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol pyrop... 23 9.6
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 23 9.6
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 23 9.6
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 23 9.6
>SPAPB24D3.03 |||agmatinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 26.6 bits (56), Expect = 0.59
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 52 KPGPFYVSPKSPKSVEFMNVIDHFY 126
K PFY P + + VEF ++++ Y
Sbjct: 16 KQSPFYAVPSNYEEVEFSSIVEPMY 40
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 24.6 bits (51), Expect = 2.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -3
Query: 234 ARQTRQKVRNNDIHRVFVTSIWHPQNLSVKITRFSVIEVIY 112
A T K+ + D+ + + IW+ Q L + SVI IY
Sbjct: 440 AAATHSKLSSEDLSSIEIVFIWYAQILWYLVFIVSVILSIY 480
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 24.6 bits (51), Expect = 2.4
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +1
Query: 10 NSARGRHQFP-PNMTKPGPFYVSPKSPKSVEFMNVIDHF--YYTESSNFDAKILRMPYRS 180
++ G +F P+ PG FY P+SP+ + + + YY + F + LR R
Sbjct: 189 STPEGAREFVVPSRLNPGKFYALPQSPQQYKQILMASGIGNYYQIARCFRDEDLRFD-RQ 247
Query: 181 NKYAMYIIVPNFLTGLPRVLNSLSDLRV 264
++ + +F+ ++ + DL V
Sbjct: 248 PEFTQIDLEMSFVDKPHEIMEVVEDLLV 275
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 24.6 bits (51), Expect = 2.4
Identities = 9/37 (24%), Positives = 18/37 (48%)
Frame = -3
Query: 171 WHPQNLSVKITRFSVIEVIYNVHELHGLW*FRRYVEW 61
W + +++ ++I + H+L G W + R EW
Sbjct: 1160 WSSETINILYQHKGYTKLIMSWHDLSGTWSWARPHEW 1196
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 24.6 bits (51), Expect = 2.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 10 NSARGRHQFPPNMTKPGPFYVSPKSPK 90
+S + Q PP TK P ++ P SP+
Sbjct: 714 DSCKAFSQAPPIATKKPPTFLKPNSPE 740
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 264 NTEIAQAI*HARQTRQKVRNNDIHRVFVTSIWHPQNLSVKITRFS 130
N + +Q + H R R + NN IH++ V H + L + + RF+
Sbjct: 771 NLKASQPMIHLRILR--ISNNAIHQLEVDQFPHLRTLYMDLNRFN 813
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 58 GPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIV 207
GPFYV KS + +++ D + SS F L YR N Y +
Sbjct: 1220 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE-KYRHNSELNYATI 1268
>SPAC1F12.02c |p23fy||translationally controlled tumor protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 23.8 bits (49), Expect = 4.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 121 FYYTESSNFDAKILRMPYRSNKYAMYII 204
FY ES + DA ++ M YR + Y+I
Sbjct: 130 FYIGESMDPDAMVVLMNYREDGITPYMI 157
>SPAC8E11.01c
||SPAC959.01|beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 23.4 bits (48), Expect = 5.5
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 31 QFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDA----KILRMPYRSNKYAMY 198
+FP T FY++ PKS+ + ++ T S+ D + + YR + A+Y
Sbjct: 353 EFPTVWTSATVFYLAVSIPKSIVLESPMEFLCLTWSTTPDVETSKEYFELGYRFHDGAVY 412
Query: 199 I 201
+
Sbjct: 413 V 413
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 23.4 bits (48), Expect = 5.5
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 28 HQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKIL 162
H P + F +SP V N IDH Y S A+ +
Sbjct: 331 HLLPDPSSNSHSFVISPNDIVYVRERNQIDHVKYLVSKEMYAEAI 375
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 23.4 bits (48), Expect = 5.5
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 88 KSVEFMNVIDHFYYTESSNFDA 153
+++EF + IDH +Y S F++
Sbjct: 328 QTLEFESFIDHRFYNTKSRFNS 349
>SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate synthase
Arg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 23.0 bits (47), Expect = 7.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 6 H*FGTRASPVPTEYDKTWTIL 68
H + AS +P E+ TWT L
Sbjct: 344 HGYAVDASTLPAEWKATWTNL 364
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 23.0 bits (47), Expect = 7.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 124 YYTESSNFDAKILRMPYRSNKYAMYIIVPNFLTGLPR 234
Y+ + + I+ +P+R +++ IV FLT L R
Sbjct: 610 YHPAADVISSLIVDLPFRFINISVFSIVLYFLTNLKR 646
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
Frame = -3
Query: 75 RYVEWSRFC-HI 43
RY+EW FC HI
Sbjct: 247 RYIEWQNFCFHI 258
>SPBC20F10.02c |||DUF1741 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 600
Score = 22.6 bits (46), Expect = 9.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 100 TPRTLVISAIRRMVQVLSYSVGTGDALV 17
+P V + ++ VL+Y + GDALV
Sbjct: 460 SPTEDVTRLLELILDVLAYIISNGDALV 487
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 22.6 bits (46), Expect = 9.6
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +1
Query: 70 VSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMP 171
+ PK+P + N + F ++ S + LR+P
Sbjct: 54 LGPKTPTAFNSANTVRFFSFSSISRLVFRSLRLP 87
>SPBC530.12c |pdf1||palmitoyl protein thioesterase-dolichol
pyrophosphate phosphatase fusion 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 22.6 bits (46), Expect = 9.6
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 76 PKSPKSVEFMNVIDHFYY 129
PKS ++ F+ + HF+Y
Sbjct: 384 PKSFANLAFITIFSHFFY 401
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 22.6 bits (46), Expect = 9.6
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 52 KPGPFYVSPKSPKSVEFMNVIDHFYYTESSN 144
KPGP YV+ S K + ++ Y S+
Sbjct: 291 KPGPLYVNVDSGKPTSTVEGLEQGYVVVDSD 321
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 22.6 bits (46), Expect = 9.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 110 TFMNSTDFGDFGDT*NGPGFVIFGG 36
T N+T FG T PG +FGG
Sbjct: 259 TTNNATPFGTSNATNTTPGSGLFGG 283
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 22.6 bits (46), Expect = 9.6
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 16 ARGRHQFPPNMTKPGP-FYVSPKSPKSVEFMNVIDHF 123
AR H+ P K GP + P P+ + F N +D F
Sbjct: 91 ARLPHEAPIKEAKLGPDTNIRPSEPR-IGFQNYLDEF 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,044,416
Number of Sequences: 5004
Number of extensions: 18331
Number of successful extensions: 70
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 55545318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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