Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O01
         (266 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    29   0.45 
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr...    28   0.79 
AL032655-9|CAA21725.3|  339|Caenorhabditis elegans Hypothetical ...    26   3.2  
AL032655-8|CAH60799.1|  348|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z81548-4|CAB04465.1|  916|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z81503-5|CAB04114.1|  916|Caenorhabditis elegans Hypothetical pr...    25   7.4  
AF022980-2|AAG24188.3|  343|Caenorhabditis elegans Hypothetical ...    25   9.7  

>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 12  FGTRASPVPTEYDKTWTILRIAEITKVRGVHERYRSLL 125
           F TR S + + YD  W +  + E  +++  HE+ RS+L
Sbjct: 689 FSTRRSELISRYDFIWKLQALDEQLQMKRKHEQNRSVL 726


>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
            F35G12.8 protein.
          Length = 1549

 Score = 28.3 bits (60), Expect = 0.79
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = +1

Query: 34   FPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAM 195
            F  +M +P PFYV  +   ++++ NV     Y      +A+ + +  R+N + +
Sbjct: 1292 FALHMFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFEL 1345


>AL032655-9|CAA21725.3|  339|Caenorhabditis elegans Hypothetical
           protein Y6B3B.5a protein.
          Length = 339

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 169 PYRSNKYAMYIIVPNFLTGLPRVLNSLSDLRV 264
           PYR + YA++  V   L  +P     LSD+RV
Sbjct: 123 PYRLDNYAVWQSVKEILDKIPSRRLQLSDVRV 154


>AL032655-8|CAH60799.1|  348|Caenorhabditis elegans Hypothetical
           protein Y6B3B.5b protein.
          Length = 348

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 169 PYRSNKYAMYIIVPNFLTGLPRVLNSLSDLRV 264
           PYR + YA++  V   L  +P     LSD+RV
Sbjct: 132 PYRLDNYAVWQSVKEILDKIPSRRLQLSDVRV 163


>Z81548-4|CAB04465.1|  916|Caenorhabditis elegans Hypothetical
           protein F14F7.5 protein.
          Length = 916

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 7   INSARGRHQFPPNMTKPGPFYVSPKSPKS 93
           ++S    +Q PP+  +PGP   SP +P +
Sbjct: 786 LSSPAPSNQSPPSQPQPGPRGSSPPAPSA 814


>Z81503-5|CAB04114.1|  916|Caenorhabditis elegans Hypothetical
           protein F14F7.5 protein.
          Length = 916

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 7   INSARGRHQFPPNMTKPGPFYVSPKSPKS 93
           ++S    +Q PP+  +PGP   SP +P +
Sbjct: 786 LSSPAPSNQSPPSQPQPGPRGSSPPAPSA 814


>AF022980-2|AAG24188.3|  343|Caenorhabditis elegans Hypothetical
           protein T03D3.5 protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 64  FYVSPKSPKSVEFMNVIDHFYYTESS 141
           FY+S    KSV+   ++D FYY+E +
Sbjct: 154 FYLSKMLKKSVDTKTLVD-FYYSEKN 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,714,117
Number of Sequences: 27780
Number of extensions: 97583
Number of successful extensions: 237
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)