Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_O01
         (266 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   0.16 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   3.5  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   3.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   3.5  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   3.5  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.0 bits (52), Expect = 0.16
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 264 NTEIAQAI*HARQTRQKVRNNDI 196
           N  IAQ I HA+ T    RNND+
Sbjct: 414 NQNIAQNIDHAKNTIIDYRNNDL 436


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 167 CHIEVTNTRCISLFL 211
           CH EV   RC+  +L
Sbjct: 317 CHAEVVARRCLCEYL 331


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +1

Query: 58  GPFYVSPKSPKSVEFMNVIDHFYYTESSNF 147
           G FY      K  +   + DHF + E   F
Sbjct: 148 GTFYPLTGMSKETQQKLIDDHFLFKEGDRF 177


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 11/39 (28%), Positives = 14/39 (35%)
 Frame = +1

Query: 1   CCINSARGRHQFPPNMTKPGPFYVSPKSPKSVEFMNVID 117
           C +N   G    PP    P P   S   P S +   + D
Sbjct: 326 CLVNIVLGDSDTPPKPAPPPP-PPSSSGPDSAKLDKIFD 363


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +1

Query: 58  GPFYVSPKSPKSVEFMNVIDHFYYTESSNF 147
           G FY      K  +   + DHF + E   F
Sbjct: 164 GTFYPLTGMSKETQQKLIDDHFLFKEGDRF 193


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,407
Number of Sequences: 438
Number of extensions: 1354
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)