Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_N24
(310 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p pro... 59 1e-09
AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-P... 59 1e-09
AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-P... 33 0.072
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 30 0.51
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 30 0.51
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 30 0.51
AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-P... 30 0.51
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 30 0.51
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 30 0.51
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 30 0.51
BT030286-1|ABN49425.1| 649|Drosophila melanogaster IP18554p pro... 27 3.6
AE014298-762|AAF46052.1| 643|Drosophila melanogaster CG17758-PA... 27 6.2
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro... 26 8.2
AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p pro... 26 8.2
AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA... 26 8.2
>AY070994-1|AAL48616.1| 262|Drosophila melanogaster RE08669p
protein.
Length = 262
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 106 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 285
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 286 SRKSFYPT 309
K+ YPT
Sbjct: 83 KSKASYPT 90
>AE014297-4764|AAF57167.1| 262|Drosophila melanogaster CG11522-PB,
isoform B protein.
Length = 262
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +1
Query: 106 NYDLGNGVLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLK 285
N L G+LR+SK++MY ++A+Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 286 SRKSFYPT 309
K+ YPT
Sbjct: 83 KSKASYPT 90
>AE013599-1637|AAS64860.1| 1346|Drosophila melanogaster CG17054-PB,
isoform B protein.
Length = 1346
Score = 33.1 bits (72), Expect = 0.072
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 74 VSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYI-SLSVRRTRKLKSPRNQPSWLSK*AV 250
+S S AN+ I S T S SP+AG L I SL +R+ + + P +SK V
Sbjct: 1104 ISESPNAANKVIEASPTAASPSPRAGHEASHLRIRSLRIRKVASTSTSQTTPKPVSKRKV 1163
Query: 251 KRME 262
+E
Sbjct: 1164 VHLE 1167
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 211
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3666 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3724
Query: 212 --PRNQ 223
PRNQ
Sbjct: 3725 YQPRNQ 3730
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 211
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 212 --PRNQ 223
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 211
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3615 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3673
Query: 212 --PRNQ 223
PRNQ
Sbjct: 3674 YQPRNQ 3679
>AE014297-4763|AAF57166.1| 243|Drosophila melanogaster CG11522-PA,
isoform A protein.
Length = 243
Score = 30.3 bits (65), Expect = 0.51
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 106 NYDLGNGVLRFSKSRMYHKKAIYK 177
N L G+LR+SK++MY ++A+Y+
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYR 46
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 211
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3615 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3673
Query: 212 --PRNQ 223
PRNQ
Sbjct: 3674 YQPRNQ 3679
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 211
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 212 --PRNQ 223
PRNQ
Sbjct: 3731 YQPRNQ 3736
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 32 SPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPKAGCTTRRLYISLSVRRTRKLKS 211
SP+ R QP P + ++TS ++SP A TTR L S S T K+ S
Sbjct: 3672 SPVGRPMVSQPSPQQQVQQTQQQHALITSPQSSNISPLASPTTRVLSSSNS-PTTSKVNS 3730
Query: 212 --PRNQ 223
PRNQ
Sbjct: 3731 YQPRNQ 3736
>BT030286-1|ABN49425.1| 649|Drosophila melanogaster IP18554p
protein.
Length = 649
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 26 HHSPMWRRNPPQPQPAVSRSRKLANRGIMTSETVYSVSPK 145
+HS +PP+P P SRS L E+ + +P+
Sbjct: 532 NHSASGSHSPPKPMPRTSRSNSLPEASDSAGESSSTNTPR 571
>AE014298-762|AAF46052.1| 643|Drosophila melanogaster CG17758-PA
protein.
Length = 643
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 231 HDGWFLGLFSFRVLLTDKLIYSLLVVHPAF---GETEYTVSEVII 106
H G F+G+ + + +I+ +L+ P F TE T+ E++I
Sbjct: 329 HKGLFVGILILVLTIISLIIFFVLISRPEFVAMAVTEVTICELLI 373
>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p protein.
Length = 2112
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 126 TVSEVIIPRFANFLLLDTAGCGCGGFLRHIG 34
T+++ I PRF+N+L + GG R +G
Sbjct: 1787 TLTKSIQPRFSNYLSYERGNAAAGGAERVVG 1817
>AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p protein.
Length = 1553
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 126 TVSEVIIPRFANFLLLDTAGCGCGGFLRHIG 34
T+++ I PRF+N+L + GG R +G
Sbjct: 1228 TLTKSIQPRFSNYLSYERGNAAAGGAERVVG 1258
>AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA
protein.
Length = 2181
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 126 TVSEVIIPRFANFLLLDTAGCGCGGFLRHIG 34
T+++ I PRF+N+L + GG R +G
Sbjct: 1856 TLTKSIQPRFSNYLSYERGNAAAGGAERVVG 1886
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,849,316
Number of Sequences: 53049
Number of extensions: 269844
Number of successful extensions: 876
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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