Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_N22
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 48 5e-06
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 48 5e-06
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 45 3e-05
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 45 3e-05
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 44 8e-05
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 44 8e-05
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 44 8e-05
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 42 2e-04
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 42 2e-04
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 39 0.002
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 38 0.005
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 38 0.005
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 38 0.005
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 38 0.005
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 38 0.005
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 34 0.048
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 34 0.048
AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical ... 29 1.4
AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical ... 29 1.4
Z81568-16|CAB76729.1| 215|Caenorhabditis elegans Hypothetical p... 28 4.2
AL032671-1|CAA21777.2| 215|Caenorhabditis elegans Hypothetical ... 28 4.2
Z77665-1|CAB01220.1| 339|Caenorhabditis elegans Hypothetical pr... 27 5.5
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 27 7.3
Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF100663-4|AAC68982.2| 440|Caenorhabditis elegans Hypothetical ... 27 9.7
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 47.6 bits (108), Expect = 5e-06
Identities = 26/98 (26%), Positives = 47/98 (47%)
Frame = +1
Query: 196 FAPLWKLIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNN 375
FAP+ ++ PS + I ++D +F + +NV ++ EDLK+ + G + +QG QE ++
Sbjct: 29 FAPVCRISPSESS---EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTDH 85
Query: 376 RDVFATRFHHTYNKPSNASSSLITGKLTTDGFLVVTVP 489
F P + + L+ DG L + P
Sbjct: 86 -GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 47.6 bits (108), Expect = 5e-06
Identities = 26/98 (26%), Positives = 47/98 (47%)
Frame = +1
Query: 196 FAPLWKLIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNN 375
FAP+ ++ PS + I ++D +F + +NV ++ EDLK+ + G + +QG QE ++
Sbjct: 29 FAPVCRISPSESS---EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTDH 85
Query: 376 RDVFATRFHHTYNKPSNASSSLITGKLTTDGFLVVTVP 489
F P + + L+ DG L + P
Sbjct: 86 -GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +1
Query: 196 FAPLWKLIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNN 375
F P+ + PS + +I ++D +F + +NV ++ EDLK+ + G + +QG QE +
Sbjct: 29 FTPVCRGSPS--ESSEQIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKTEH 86
Query: 376 RDVFATRFHHTYNKPSNASSSLITGKLTTDGFLVVTVP 489
F P + + L+ DG L + P
Sbjct: 87 -GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 123
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 44.8 bits (101), Expect = 3e-05
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +1
Query: 244 RIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPS 423
++++ ++F+V ++V+ + ++++VKV+G + + E ++N A + Y P
Sbjct: 26 KVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPD 85
Query: 424 NASSSLITGKLTTDGFLVVT 483
+ S + L T G L +T
Sbjct: 86 DVDVSTVKSHLATRGVLTIT 105
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = +1
Query: 196 FAPLWKLIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNN 375
F P+ + PS + I ++D +F + +NV ++ EDLK+ + G + +QG QE +
Sbjct: 29 FTPVCRGSPSESS---EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKTEH 85
Query: 376 RDVFATRFHHTYNKPSNASSSLITGKLTTDGFLVVTVP 489
F P + + L+ DG L + P
Sbjct: 86 -GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = +1
Query: 196 FAPLWKLIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNN 375
F P+ + PS + I ++D +F + +NV ++ EDLK+ + G + +QG QE +
Sbjct: 29 FTPVCRGSPSESS---EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKTEH 85
Query: 376 RDVFATRFHHTYNKPSNASSSLITGKLTTDGFLVVTVP 489
F P + + L+ DG L + P
Sbjct: 86 -GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = +1
Query: 196 FAPLWKLIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNN 375
F P+ + PS + I ++D +F + +NV ++ EDLK+ + G + +QG QE +
Sbjct: 29 FTPVCRGSPSESS---EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQELKTEH 85
Query: 376 RDVFATRFHHTYNKPSNASSSLITGKLTTDGFLVVTVP 489
F P + + L+ DG L + P
Sbjct: 86 -GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 247 IYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPSN 426
+ ++D ++ V V+V + E+LKV + + + ++G + F YN P+
Sbjct: 50 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 109
Query: 427 ASSSLITGKLTTDGFLVV 480
I +L+ +G L V
Sbjct: 110 VRPEQIKSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +1
Query: 247 IYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPSN 426
+ ++D ++ V V+V + E+LKV + + + ++G + F YN P+
Sbjct: 49 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 108
Query: 427 ASSSLITGKLTTDGFLVV 480
I +L+ +G L V
Sbjct: 109 VRPEQIKSELSNNGVLTV 126
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 247 IYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPSN 426
I + +D+F V +NV +++ E+LKV + G + +QG + N + F P +
Sbjct: 45 IMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEHDVENEH-GASRKSFSRMILLPED 103
Query: 427 ASSSLITGKLTTDGFLVVTVP 489
+ + L+ DG L + P
Sbjct: 104 VDITSVATNLSNDGKLCIEAP 124
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/89 (23%), Positives = 44/89 (49%)
Frame = +1
Query: 223 SFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFH 402
+F+D I +D+ +F V ++V ++ E+LK+K+ G + ++G QE + + F
Sbjct: 39 NFSDNIGEIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEH-GYLKRSFS 97
Query: 403 HTYNKPSNASSSLITGKLTTDGFLVVTVP 489
P +A + ++ +G L + P
Sbjct: 98 KMILLPEDADLPSVKSAISNEGKLQIEAP 126
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +1
Query: 223 SFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFH 402
+F+D I +D+ +F V ++V ++ EDLK+++ G + ++G QE + F
Sbjct: 31 NFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQE-KKSEHGYSKRSFS 89
Query: 403 HTYNKPSNASSSLITGKLTTDGFLVVTVP 489
P + + + ++ +G L + P
Sbjct: 90 KMILLPEDVDLTSVKSAISNEGKLQIEAP 118
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +1
Query: 223 SFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFH 402
+F+D I +D+ +F V ++V ++ EDLK+++ G + ++G QE + F
Sbjct: 39 NFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQE-KKSEHGYSKRSFS 97
Query: 403 HTYNKPSNASSSLITGKLTTDGFLVVTVP 489
P + + + ++ +G L + P
Sbjct: 98 KMILLPEDVDLTSVKSAISNEGKLQIEAP 126
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +1
Query: 223 SFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFH 402
+F+D I +D+ +F V ++V ++ EDLK+++ G + ++G QE + F
Sbjct: 39 NFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQE-KKSEHGYSKRSFS 97
Query: 403 HTYNKPSNASSSLITGKLTTDGFLVVTVP 489
P + + + ++ +G L + P
Sbjct: 98 KMILLPEDVDLTSVKSAISNEGKLQIEAP 126
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +1
Query: 223 SFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFH 402
+F+D I +D+ +F V ++V ++ EDLK+++ G + ++G QE + F
Sbjct: 39 NFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQE-KKSEHGYSKRSFS 97
Query: 403 HTYNKPSNASSSLITGKLTTDGFLVVTVP 489
P + + + ++ +G L + P
Sbjct: 98 KMILLPEDVDLTSVKSAISNEGKLQIEAP 126
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 268 FQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPSNASSSLIT 447
F +++V Y + LKV V + I V+GS + + F + P + +
Sbjct: 81 FHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLPKAVAPESVQ 140
Query: 448 GKLTTDGFLVV 480
+LT DG L +
Sbjct: 141 SQLTADGHLTI 151
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = +1
Query: 244 RIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPS 423
++ + ++F+V ++ + D+ VKV G I + + + H TY P
Sbjct: 26 KVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPE 85
Query: 424 NASSSLITGKLTTDGFLVVT 483
+ S + L + G L +T
Sbjct: 86 DVDPSTVRSHLNSSGVLTIT 105
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 34.3 bits (75), Expect = 0.048
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +1
Query: 247 IYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPSN 426
+ DDD F+V + ++ ++++VK G+L+ + ++ + Y P N
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKN 86
Query: 427 ASSSLITGKLTTDGFL 474
I L + G L
Sbjct: 87 VDMKTIKSNLDSHGIL 102
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 34.3 bits (75), Expect = 0.048
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +1
Query: 247 IYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDVFATRFHHTYNKPSN 426
+ DDD F+V + ++ ++++VK G+L+ + ++ + Y P N
Sbjct: 27 VLDDDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKN 86
Query: 427 ASSSLITGKLTTDGFL 474
I L + G L
Sbjct: 87 VDMKTIKSNLDSHGIL 102
>AC006696-6|AAF39986.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.4 protein.
Length = 141
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 337 IFVQGSQEANNNNRDVFATRFHHTYNKPSNASSSLITGKLTT 462
IF+Q SQ NNNN RF +N + A+S IT + TT
Sbjct: 95 IFIQPSQCCNNNNFSCCPFRFRR-HNSAAAAASDEITEEPTT 135
>AC006696-5|AAF39987.1| 141|Caenorhabditis elegans Hypothetical
protein W08E12.5 protein.
Length = 141
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 337 IFVQGSQEANNNNRDVFATRFHHTYNKPSNASSSLITGKLTT 462
IF+Q SQ NNNN RF +N + A+S IT + TT
Sbjct: 95 IFIQPSQCCNNNNFSCCPFRFRR-HNSAAAAASDEITEEPTT 135
>Z81568-16|CAB76729.1| 215|Caenorhabditis elegans Hypothetical
protein 3R5.1 protein.
Length = 215
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = +1
Query: 214 LIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDV 384
++P IG I ++ + +NV D + DL +G+ + +Q A+ +R++
Sbjct: 80 IVPPNPRIGKAIEEFGKEYLIEINVYDEHRADLVSLNSGNFVAIQNVHAASTPHREI 136
>AL032671-1|CAA21777.2| 215|Caenorhabditis elegans Hypothetical
protein 3R5.1 protein.
Length = 215
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = +1
Query: 214 LIPSFADIGPRIYSDDDQFQVVVNVKDYRKEDLKVKVTGDLIFVQGSQEANNNNRDV 384
++P IG I ++ + +NV D + DL +G+ + +Q A+ +R++
Sbjct: 80 IVPPNPRIGKAIEEFGKEYLIEINVYDEHRADLVSLNSGNFVAIQNVHAASTPHREI 136
>Z77665-1|CAB01220.1| 339|Caenorhabditis elegans Hypothetical
protein K02E11.2 protein.
Length = 339
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = -2
Query: 384 YVTVIIISLLRSLDEDQIPSYFHFQIFFPVIFHVDDYLELIVVGIYPGADV 232
+V++II+S+ L ++ + Q + PV+FHV + + ++G Y G +
Sbjct: 142 WVSLIILSIFHPLVFAS--AFAYIQCWLPVVFHVISFFVVNIIG-YVGVQI 189
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 127 PPITSITDDDLSFPWMSISPFSLFAPLWKLIPSFADIGPRIYSDDDQFQV 276
PPIT+ +D+ ++ SP L A L K + S P+I+ + ++ ++
Sbjct: 298 PPITTTYSEDIIDSEVTKSPQELIAELKKALKSEISGKPKIFKEAEEPEI 347
>Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical
protein C31C9.3 protein.
Length = 377
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = -2
Query: 420 RLIVRVVEPCGKYVTVIIISLLRSLDEDQIPSYFHFQIFFPVIFHVDDYLELI 262
RL++R V PC + + ++ + ++ IP++ H +H DY ++I
Sbjct: 94 RLLLRNVSPCFRSIAEDHVNEVTNISVTSIPNHVHV-----CFYHESDYTDII 141
>AF100663-4|AAC68982.2| 440|Caenorhabditis elegans Hypothetical
protein K08B4.5 protein.
Length = 440
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 375 VIIISLLRSLDEDQIPSYFHFQIFFPVIFHVDDYLE 268
V+ I ++R+ D+ + H + FP H+D++LE
Sbjct: 95 VVFIEVMRTTVIDEHATKIHDKFEFPFHIHMDNFLE 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,772,730
Number of Sequences: 27780
Number of extensions: 209179
Number of successful extensions: 605
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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