Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_N18
(232 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 130 3e-33
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 130 3e-33
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.16
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.21
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 0.37
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 2.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 2.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 2.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 2.0
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 2.0
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 2.6
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 20 4.6
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 4.6
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 19 6.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 6.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 19 8.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 19 8.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 19 8.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 19 8.0
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 130 bits (313), Expect = 3e-33
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 130 bits (313), Expect = 3e-33
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +3
Query: 51 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIEKFEKEAQEMGKGSFKYAWVL 230
MGKEK+HINIVVIGHVDSGKSTTTGHLIYKCGGID+RTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.16
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 63 KVHINIVVIGHVDSGKST 116
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.21
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 72 INIVVIGHVDSGKST 116
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.4 bits (48), Expect = 0.37
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +2
Query: 2 HEARILHADCNP---*LTKNGQRK 64
H A I+HAD P ++KNGQ K
Sbjct: 172 HNAGIVHADVKPKNILMSKNGQPK 195
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 2.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 2.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 2.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 2.0
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 180 SRTFRWYVRRYHRICRSSDQLL 115
+R +R R+Y ++C ++LL
Sbjct: 9 NREYRKKDRQYEKLCNEEEKLL 30
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 2.0
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = -2
Query: 168 RWYVRRYHRIC 136
RW + ++HR+C
Sbjct: 186 RWDLGKFHRVC 196
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 20.6 bits (41), Expect = 2.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -3
Query: 227 YPSVFEGTLTHFLG 186
YPS+ +GT ++ LG
Sbjct: 25 YPSIRQGTTSYCLG 38
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 19.8 bits (39), Expect = 4.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 115 QQLVT*STNAVVSTNVPSKSSRRKPRKWVRVPS 213
++L+T VV N+ K S +PR+ + S
Sbjct: 26 KRLITGDEKWVVYNNIKRKRSWSRPRESAQTTS 58
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.8 bits (39), Expect = 4.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 136 TNAVVSTNVPSKSSRRKPRKWVRVPS 213
TNA + S+S R+ ++ RVPS
Sbjct: 1767 TNASAHSRSGSQSMPRQNGRYSRVPS 1792
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 19.4 bits (38), Expect = 6.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 115 QQLVT*STNAVVSTNVPSKSSRRKPRK 195
++L+T VV N+ K S +PR+
Sbjct: 147 KRLITGDEKWVVYNNIKRKRSWSRPRE 173
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.4 bits (38), Expect = 6.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 93 HVDSGKSTTTGH 128
H DSG++ + GH
Sbjct: 386 HSDSGENNSRGH 397
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 19.0 bits (37), Expect = 8.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 64 FSLPIFG 44
FSLPIFG
Sbjct: 57 FSLPIFG 63
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 162 YVRRYHRICRSSDQLLW 112
Y+ + CR +DQ+L+
Sbjct: 268 YISDFVGSCRKTDQILY 284
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 19.0 bits (37), Expect = 8.0
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -2
Query: 162 YVRRYHRICRSSDQLLW 112
Y+ + CR +DQ+L+
Sbjct: 306 YISDFVGSCRKTDQILY 322
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 19.0 bits (37), Expect = 8.0
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +2
Query: 143 RWYRRTYHRKVREGSP 190
+W+ R+ ++V G+P
Sbjct: 615 QWHTRSTEKRVSAGTP 630
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,822
Number of Sequences: 438
Number of extensions: 1072
Number of successful extensions: 26
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used: 3785850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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