Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_N16
         (312 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro...    27   6.5  
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    27   6.5  
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB...    27   6.5  
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA...    27   6.5  

>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p protein.
          Length = 1823

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 281  QAPSHSTIFHTTVQP 237
            QAP  ST+FHTT  P
Sbjct: 975  QAPDGSTVFHTTTTP 989


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
           protein encore protein.
          Length = 1548

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 281 QAPSHSTIFHTTVQP 237
           QAP  ST+FHTT  P
Sbjct: 826 QAPDGSTVFHTTTTP 840


>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
            isoform B protein.
          Length = 1818

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 281  QAPSHSTIFHTTVQP 237
            QAP  ST+FHTT  P
Sbjct: 970  QAPDGSTVFHTTTTP 984


>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
            isoform A protein.
          Length = 1823

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 281  QAPSHSTIFHTTVQP 237
            QAP  ST+FHTT  P
Sbjct: 975  QAPDGSTVFHTTTTP 989


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,235,735
Number of Sequences: 53049
Number of extensions: 192859
Number of successful extensions: 486
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)