Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_N15
(167 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 0.60
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 0.60
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 0.79
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 0.79
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 1.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 3.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 3.2
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 19 5.6
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 19 5.6
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 19 5.6
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 19 7.3
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 19 7.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 18 9.7
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 0.60
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DCKPSIREENKELCYWPGHPAN 151
DC I +E L YW G+ AN
Sbjct: 58 DCFVRIPKEQGFLSYWRGNLAN 79
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 0.60
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 86 DCKPSIREENKELCYWPGHPAN 151
DC I +E L YW G+ AN
Sbjct: 58 DCFVRIPKEQGFLSYWRGNLAN 79
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 0.79
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2
Query: 116 KELCYWPGHPANQ 154
++ CY+P HP+ Q
Sbjct: 385 EKTCYYPYHPSTQ 397
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 0.79
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +2
Query: 116 KELCYWPGHPANQ 154
++ CY+P HP+ Q
Sbjct: 385 EKTCYYPYHPSTQ 397
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 1.8
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -3
Query: 162 IDLWLAGC 139
+D+W+AGC
Sbjct: 262 LDVWMAGC 269
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 98 RVYNLLGLNFLHHKWSG 48
R++NL+ + L WSG
Sbjct: 278 RIFNLICMMLLIGHWSG 294
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 3.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 98 RVYNLLGLNFLHHKWSG 48
R++NL+ + L WSG
Sbjct: 246 RIFNLICMMLLIGHWSG 262
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -2
Query: 154 LVGWMSWP 131
L GW WP
Sbjct: 172 LAGWNDWP 179
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -2
Query: 154 LVGWMSWP 131
L GW WP
Sbjct: 172 LAGWNDWP 179
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 19.0 bits (37), Expect = 5.6
Identities = 5/8 (62%), Positives = 5/8 (62%)
Frame = -2
Query: 154 LVGWMSWP 131
L GW WP
Sbjct: 172 LAGWNDWP 179
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 95 PSIREENKELCYWPG 139
P R+E ++ C W G
Sbjct: 341 PRYRQELQKRCKWMG 355
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 95 PSIREENKELCYWPG 139
P R+E ++ C W G
Sbjct: 341 PRYRQELQKRCKWMG 355
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -1
Query: 152 GWLDVLANSKVLCSL 108
GW+ LA V C L
Sbjct: 368 GWIHHLARHAVACFL 382
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,288
Number of Sequences: 438
Number of extensions: 368
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 35
effective length of database: 131,013
effective search space used: 2620260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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