Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_N12
         (489 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    32   0.48 
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    32   0.48 
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    30   2.0  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIRT 487
           A K Q+K++KG  G R RKIRT
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRT 155


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIRT 487
           A K Q+K++KG  G R RKIRT
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRT 163


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 422 ALKAQRKVVKGEHGNRVRKIR 484
           A K Q+K++KG  G R RKIR
Sbjct: 142 AKKVQKKIIKGAFGTRARKIR 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,155,964
Number of Sequences: 53049
Number of extensions: 132796
Number of successful extensions: 276
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)