Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_N10
         (333 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL360295-1|CAH73130.1|  728|Homo sapiens chromosome 1 open readi...    29   3.4  
AL035705-1|CAI22671.1|  728|Homo sapiens chromosome 1 open readi...    29   3.4  
AK125198-1|BAC86080.1|  358|Homo sapiens protein ( Homo sapiens ...    29   3.4  
BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein.       28   7.9  
AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepi...    28   7.9  
AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein.     28   7.9  

>AL360295-1|CAH73130.1|  728|Homo sapiens chromosome 1 open reading
           frame 168 protein.
          Length = 728

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 289 KITRIKTSETENCSVAHGEWRSGALLLCSRTGSRRASLYLDNTQ 158
           KI   + SE   CS + G    G   +CS T S++ASL L+ TQ
Sbjct: 78  KIKLAQKSEIPKCSNSPGPL--GKSTVCSATSSQKASLLLEVTQ 119


>AL035705-1|CAI22671.1|  728|Homo sapiens chromosome 1 open reading
           frame 168 protein.
          Length = 728

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 289 KITRIKTSETENCSVAHGEWRSGALLLCSRTGSRRASLYLDNTQ 158
           KI   + SE   CS + G    G   +CS T S++ASL L+ TQ
Sbjct: 78  KIKLAQKSEIPKCSNSPGPL--GKSTVCSATSSQKASLLLEVTQ 119


>AK125198-1|BAC86080.1|  358|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43208 fis, clone FEBRA2014213. ).
          Length = 358

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -3

Query: 289 KITRIKTSETENCSVAHGEWRSGALLLCSRTGSRRASLYLDNTQ 158
           KI   + SE   CS + G    G   +CS T S++ASL L+ TQ
Sbjct: 78  KIKLAQKSEIPKCSNSPGPL--GKSTVCSATSSQKASLLLEVTQ 119


>BC150279-1|AAI50280.1| 1797|Homo sapiens BZRAP1 protein protein.
          Length = 1797

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 142  CLSDNPAYYRGRARRVGCQSGNKAAARPSATHRAQHCS 255
            CL D P    G +RR G  S  K  +R       +HCS
Sbjct: 1332 CLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCS 1369


>AF039571-1|AAD11957.1| 1857|Homo sapiens peripheral benzodiazepine
            receptor interacting protein protein.
          Length = 1857

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 142  CLSDNPAYYRGRARRVGCQSGNKAAARPSATHRAQHCS 255
            CL D P    G +RR G  S  K  +R       +HCS
Sbjct: 1392 CLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCS 1429


>AB014512-1|BAA31587.2| 1810|Homo sapiens KIAA0612 protein protein.
          Length = 1810

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +1

Query: 142  CLSDNPAYYRGRARRVGCQSGNKAAARPSATHRAQHCS 255
            CL D P    G +RR G  S  K  +R       +HCS
Sbjct: 1345 CLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCS 1382


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,558,168
Number of Sequences: 237096
Number of extensions: 730942
Number of successful extensions: 1427
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1427
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)