Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_N10
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.2  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              20   6.8  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              20   6.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   9.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.1  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 151 DNPAYYRGRARRVGCQSGNKAAARPSATH 237
           D   +Y+ R +R    +G   +  P+ TH
Sbjct: 576 DEVEFYKRRPQRACSTTGGVPSKSPTLTH 604


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = -3

Query: 289  KITRIKTSETENCSVAHGEWRSGALLLCSRTGSRRASLYLDNTQGCHSGNN 137
            KI   K + T  CS  +GE  S A      T +    L L+      SG +
Sbjct: 883  KIPSYKPASTPGCSSKNGEPTSAAFAQGFATAASSPGL-LERASPAFSGTS 932


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 222 PERHSPCATLQFSVSD 269
           P+R++ C   QF++ D
Sbjct: 59  PQRYNECILKQFNIVD 74


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +3

Query: 222 PERHSPCATLQFSVSD 269
           P+R++ C   QF++ D
Sbjct: 59  PQRYNECILKQFNIVD 74


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 161  RIIEVERGASAASPGTKQQRARAPLTVRNT 250
            R+I      S+ SPG +QQ  +   +  NT
Sbjct: 1275 RVIAPTTITSSQSPGNQQQTIQTQPSRNNT 1304


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 181 SLYLDNTQGCHSGN 140
           SLYL   Q  H+GN
Sbjct: 366 SLYLTKVQLIHAGN 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,795
Number of Sequences: 438
Number of extensions: 1274
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)