Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_N08
(427 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 0.62
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.62
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 3.3
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 4.4
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 5.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 5.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 5.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 5.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 0.62
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 348 GHAVGDIPGVRFKVVKVANVSLL 416
GH V D+PGVR +V++ + LL
Sbjct: 69 GHPVNDVPGVR-RVLRNGTLVLL 90
Score = 20.6 bits (41), Expect = 7.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 115 TWVRDGRRTP 144
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
Score = 20.6 bits (41), Expect = 7.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1
Query: 412 SDTFATLTTLNLTPGMSPTAWPLRPNPAT 326
S ++ T PG+ P A L PN T
Sbjct: 1486 SSPVLSVRTQGQAPGIPPAATFLSPNSTT 1514
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 0.62
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 348 GHAVGDIPGVRFKVVKVANVSLL 416
GH V D+PGVR +V++ + LL
Sbjct: 69 GHPVNDVPGVR-RVLRNGTLVLL 90
Score = 20.6 bits (41), Expect = 7.6
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 115 TWVRDGRRTP 144
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
Score = 20.6 bits (41), Expect = 7.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1
Query: 412 SDTFATLTTLNLTPGMSPTAWPLRPNPAT 326
S ++ T PG+ P A L PN T
Sbjct: 1482 SSPVLSVRTQGQAPGIPPAATFLSPNSTT 1510
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 1.4
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 348 GHAVGDIPGVR 380
G AVGD+PG+R
Sbjct: 42 GSAVGDVPGLR 52
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 1.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +3
Query: 45 RTARKHVNHRRE----QRWADKEFKKAH--MGTRWKANPFGGASHAKGIVLEKVGVEAKQ 206
RT + + +RRE Q+ ++E++K M ++ +H K +VLE+ ++K
Sbjct: 30 RTKEERLQYRREAWLVQQEREQEYEKLKRKMILEYELYIKYSHTHEKKLVLERSKTKSKS 89
Query: 207 PNSAIR 224
P S R
Sbjct: 90 PESRDR 95
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 207 PNSAIRKCV 233
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 4.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 383 KSDSRNVTNSVAFTTESCNSHLIV 312
KS RN+ ++ A TES ++++V
Sbjct: 267 KSGKRNIIDNSAQKTESKTNNIVV 290
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 5.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 53 AQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWCISC*GH 172
A + E+S+ A + + K P + + RW SC G+
Sbjct: 34 ATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIGY 73
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -2
Query: 66 SRACAPCEYPEV--YP 25
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -2
Query: 66 SRACAPCEYPEV--YP 25
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -2
Query: 66 SRACAPCEYPEV--YP 25
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,233
Number of Sequences: 438
Number of extensions: 2367
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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