Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_N03
         (337 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069404-1|AAL39549.1|  723|Drosophila melanogaster LD10453p pro...    27   8.0  
AF101159-1|AAF08615.1|  324|Drosophila melanogaster Lnk-like pro...    27   8.0  
AE014297-3871|AAN14065.1|  723|Drosophila melanogaster CG17367-P...    27   8.0  
AE014297-3870|AAF56524.1|  723|Drosophila melanogaster CG17367-P...    27   8.0  
AE014297-3869|AAF56523.1|  723|Drosophila melanogaster CG17367-P...    27   8.0  

>AY069404-1|AAL39549.1|  723|Drosophila melanogaster LD10453p
           protein.
          Length = 723

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 129 GSGGERGAAACSARQVLGAAACGARDGGSPA 221
           G+G + G  + +A    G  A GA  GG P+
Sbjct: 573 GNGYDNGQGSSTASNAAGGTASGAAGGGHPS 603


>AF101159-1|AAF08615.1|  324|Drosophila melanogaster Lnk-like
           protein protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 129 GSGGERGAAACSARQVLGAAACGARDGGSPA 221
           G+G + G  + +A    G  A GA  GG P+
Sbjct: 174 GNGYDNGQGSSTASNAAGGTASGAAGGGHPS 204


>AE014297-3871|AAN14065.1|  723|Drosophila melanogaster CG17367-PC,
           isoform C protein.
          Length = 723

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 129 GSGGERGAAACSARQVLGAAACGARDGGSPA 221
           G+G + G  + +A    G  A GA  GG P+
Sbjct: 573 GNGYDNGQGSSTASNAAGGTASGAAGGGHPS 603


>AE014297-3870|AAF56524.1|  723|Drosophila melanogaster CG17367-PB,
           isoform B protein.
          Length = 723

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 129 GSGGERGAAACSARQVLGAAACGARDGGSPA 221
           G+G + G  + +A    G  A GA  GG P+
Sbjct: 573 GNGYDNGQGSSTASNAAGGTASGAAGGGHPS 603


>AE014297-3869|AAF56523.1|  723|Drosophila melanogaster CG17367-PA,
           isoform A protein.
          Length = 723

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 129 GSGGERGAAACSARQVLGAAACGARDGGSPA 221
           G+G + G  + +A    G  A GA  GG P+
Sbjct: 573 GNGYDNGQGSSTASNAAGGTASGAAGGGHPS 603


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,311,109
Number of Sequences: 53049
Number of extensions: 71899
Number of successful extensions: 703
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)