Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_N02
         (400 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09850-1|AAC50266.1|  626|Homo sapiens zinc finger protein protein.    30   2.5  
BC020219-1|AAH20219.1|  626|Homo sapiens ZNF143 protein protein.       30   2.5  
AJ295844-2|CAC17610.1|  531|Homo sapiens ZNF143 protein protein.       30   2.5  
AF071771-1|AAC96102.1|  551|Homo sapiens SPH-binding factor prot...    30   2.5  
Z97832-3|CAI20189.1|  544|Homo sapiens zinc finger protein 76 (e...    30   3.3  
M91592-1|AAA98739.1|  515|Homo sapiens zinc-finger protein protein.    30   3.3  
BT007316-1|AAP35980.1|  570|Homo sapiens zinc finger protein 76 ...    30   3.3  
BC002549-1|AAH02549.1|  570|Homo sapiens zinc finger protein 76 ...    30   3.3  
BC000133-1|AAH00133.1|  570|Homo sapiens zinc finger protein 76 ...    30   3.3  

>U09850-1|AAC50266.1|  626|Homo sapiens zinc finger protein protein.
          Length = 626

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP + ++A  C +A ATG  L +HV TH   KP
Sbjct: 253 RPYQCEHAG-CGKAFATGYGLKSHVRTHTGEKP 284


>BC020219-1|AAH20219.1|  626|Homo sapiens ZNF143 protein protein.
          Length = 626

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP + ++A  C +A ATG  L +HV TH   KP
Sbjct: 253 RPYQCEHAG-CGKAFATGYGLKSHVRTHTGEKP 284


>AJ295844-2|CAC17610.1|  531|Homo sapiens ZNF143 protein protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP + ++A  C +A ATG  L +HV TH   KP
Sbjct: 253 RPYQCEHAG-CGKAFATGYGLKSHVRTHTGEKP 284


>AF071771-1|AAC96102.1|  551|Homo sapiens SPH-binding factor
           protein.
          Length = 551

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP + ++A  C +A ATG  L +HV TH   KP
Sbjct: 178 RPYQCEHAG-CGKAFATGYGLKSHVRTHTGEKP 209


>Z97832-3|CAI20189.1|  544|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 544

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP R  + + C +A ATG  L +HV TH   KP
Sbjct: 167 RPYRCDFPS-CGKAFATGYGLKSHVRTHTGEKP 198


>M91592-1|AAA98739.1|  515|Homo sapiens zinc-finger protein protein.
          Length = 515

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP R  + + C +A ATG  L +HV TH   KP
Sbjct: 193 RPYRCDFPS-CGKAFATGYGLKSHVRTHTGEKP 224


>BT007316-1|AAP35980.1|  570|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 570

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP R  + + C +A ATG  L +HV TH   KP
Sbjct: 193 RPYRCDFPS-CGKAFATGYGLKSHVRTHTGEKP 224


>BC002549-1|AAH02549.1|  570|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 570

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP R  + + C +A ATG  L +HV TH   KP
Sbjct: 193 RPYRCDFPS-CGKAFATGYGLKSHVRTHTGEKP 224


>BC000133-1|AAH00133.1|  570|Homo sapiens zinc finger protein 76
           (expressed in testis) protein.
          Length = 570

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 299 RPSRQQYAAMCARAQATGQPLPAHVFTHVNGKP 397
           RP R  + + C +A ATG  L +HV TH   KP
Sbjct: 193 RPYRCDFPS-CGKAFATGYGLKSHVRTHTGEKP 224


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,425,083
Number of Sequences: 237096
Number of extensions: 471414
Number of successful extensions: 2100
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)