BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_N02
(400 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015176-1|AAT94405.1| 857|Drosophila melanogaster SD15071p pro... 48 3e-06
BT003590-1|AAO39593.1| 841|Drosophila melanogaster LD04853p pro... 48 3e-06
AY058628-1|AAL13857.1| 576|Drosophila melanogaster LD32549p pro... 48 3e-06
AF170345-1|AAD55388.1| 841|Drosophila melanogaster metastasis a... 48 3e-06
AE014297-316|AAF51980.2| 880|Drosophila melanogaster CG2244-PA,... 48 3e-06
AE014297-315|AAF51981.2| 844|Drosophila melanogaster CG2244-PB,... 48 3e-06
AY061204-1|AAL28752.1| 192|Drosophila melanogaster LD15632p pro... 45 3e-05
>BT015176-1|AAT94405.1| 857|Drosophila melanogaster SD15071p
protein.
Length = 857
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 10 DRLPAPDHVAFPKPPKAPDGSLMYERV 90
D++P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 660 DKMPLPAVVSFPKPPKAPDGSLVYDRV 686
>BT003590-1|AAO39593.1| 841|Drosophila melanogaster LD04853p
protein.
Length = 841
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 10 DRLPAPDHVAFPKPPKAPDGSLMYERV 90
D++P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 687 DKMPLPAVVSFPKPPKAPDGSLVYDRV 713
>AY058628-1|AAL13857.1| 576|Drosophila melanogaster LD32549p
protein.
Length = 576
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 10 DRLPAPDHVAFPKPPKAPDGSLMYERV 90
D++P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 383 DKMPLPAVVSFPKPPKAPDGSLVYDRV 409
>AF170345-1|AAD55388.1| 841|Drosophila melanogaster metastasis
associated 1-like proteinprotein.
Length = 841
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 10 DRLPAPDHVAFPKPPKAPDGSLMYERV 90
D++P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 687 DKMPLPAVVSFPKPPKAPDGSLVYDRV 713
>AE014297-316|AAF51980.2| 880|Drosophila melanogaster CG2244-PA,
isoform A protein.
Length = 880
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 10 DRLPAPDHVAFPKPPKAPDGSLMYERV 90
D++P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 687 DKMPLPAVVSFPKPPKAPDGSLVYDRV 713
>AE014297-315|AAF51981.2| 844|Drosophila melanogaster CG2244-PB,
isoform B protein.
Length = 844
Score = 48.4 bits (110), Expect = 3e-06
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +1
Query: 10 DRLPAPDHVAFPKPPKAPDGSLMYERV 90
D++P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 651 DKMPLPAVVSFPKPPKAPDGSLVYDRV 677
>AY061204-1|AAL28752.1| 192|Drosophila melanogaster LD15632p
protein.
Length = 192
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +1
Query: 16 LPAPDHVAFPKPPKAPDGSLMYERV 90
+P P V+FPKPPKAPDGSL+Y+RV
Sbjct: 1 MPLPAVVSFPKPPKAPDGSLVYDRV 25
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,258,426
Number of Sequences: 53049
Number of extensions: 138401
Number of successful extensions: 759
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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