Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M24
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   5.5  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    22   5.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   5.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    21   9.6  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    21   9.6  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 210 ASLPPNVRKRIRALRTLQ 263
           AS+PPN+ + IR  + LQ
Sbjct: 762 ASIPPNLEEAIRGPQGLQ 779


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 198 VETLASLPPNVRKRIRALRTLQKQFVDIEAKFYS 299
           V+   +LP + +     L+ +  +  D+EA FY+
Sbjct: 69  VQKAGNLPKSAKLSDGCLKQMVARVTDLEASFYA 102


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 132  KHLMKSGITRNEMLAAITSRIQVETLASLPPNVRKRIR 245
            + L +   TRN    A T + Q E L   PP+ R   R
Sbjct: 1053 ERLRRYNETRNAARRAATQQRQAERLPPPPPSPRTERR 1090


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 64  VMITHPMSSLERKKKLLPAVN*LNIS*KAVSPEMK 168
           ++ THP +S E+++    A +   IS K  + EMK
Sbjct: 771 LLCTHPKASAEKEQIAQIAASLSEISVKMKALEMK 805


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 198 VETLASLPPNVRKRIRALRTLQ 263
           V  + + PP  R+R+R  R L+
Sbjct: 646 VSKVRAAPPTPRERVRCYRCLE 667


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,236
Number of Sequences: 2352
Number of extensions: 5028
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)