Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M22
(459 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 207 5e-55
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 206 1e-54
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 155 4e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 140 9e-35
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 84 9e-18
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 82 5e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 9e-14
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 67 1e-12
SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces pom... 27 1.8
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 3.2
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 25 5.6
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 24 9.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 207 bits (506), Expect = 5e-55
Identities = 105/150 (70%), Positives = 115/150 (76%)
Frame = +1
Query: 10 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 189
TACERAKRTLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+
Sbjct: 263 TACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDS 322
Query: 190 KMD*AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 369
K+D A +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L GD
Sbjct: 323 KVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDT 382
Query: 370 SEEVQDXXXXXXXXXXXGIETAGGVMTTLI 459
SE+ QD GIETAGGVMT LI
Sbjct: 383 SEKTQDLLLLDVAPLSMGIETAGGVMTPLI 412
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 206 bits (503), Expect = 1e-54
Identities = 104/150 (69%), Positives = 116/150 (77%)
Frame = +1
Query: 10 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 189
TACERAKRTLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+
Sbjct: 263 TACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDS 322
Query: 190 KMD*AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 369
K+D + +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE IL GD
Sbjct: 323 KIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDT 382
Query: 370 SEEVQDXXXXXXXXXXXGIETAGGVMTTLI 459
SE+ QD GIETAGGVMT LI
Sbjct: 383 SEKTQDLLLLDVAPLSLGIETAGGVMTPLI 412
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 155 bits (375), Expect = 4e-39
Identities = 76/146 (52%), Positives = 100/146 (68%), Gaps = 1/146 (0%)
Frame = +1
Query: 10 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 189
+ACERAKR LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+
Sbjct: 267 SACERAKRALSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDS 326
Query: 190 KMD*AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL-HGD 366
K+ A +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE +L +
Sbjct: 327 KVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKA 386
Query: 367 KSEEVQDXXXXXXXXXXXGIETAGGV 444
S++ QD G+ G V
Sbjct: 387 DSDKTQDLLLLDVVPLSLGVAMEGNV 412
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 140 bits (339), Expect = 9e-35
Identities = 72/147 (48%), Positives = 97/147 (65%)
Frame = +1
Query: 19 ERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 198
E+AKRTLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ +
Sbjct: 298 EKAKRTLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLK 357
Query: 199 *AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKSEE 378
++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G++ +
Sbjct: 358 KSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGSD 416
Query: 379 VQDXXXXXXXXXXXGIETAGGVMTTLI 459
+ GIET GGVMT LI
Sbjct: 417 --NIVLLDVIPLTLGIETTGGVMTKLI 441
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 84.2 bits (199), Expect = 9e-18
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Frame = +1
Query: 13 ACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADLFRSTMEPVEKSL 180
A E+AK LSS ++ I + + I+RA+FE+L L R T++P +++L
Sbjct: 308 AAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRAQFEKLVDPLVRRTIDPCKRAL 367
Query: 181 RDAKMD*AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILH 360
+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE +L
Sbjct: 368 KDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGVLS 426
Query: 361 GDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLI 459
G V+D GIET GGV T LI
Sbjct: 427 G----HVKDLVLLDVTPLSLGIETLGGVFTRLI 455
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 81.8 bits (193), Expect = 5e-17
Identities = 37/99 (37%), Positives = 65/99 (65%)
Frame = +1
Query: 22 RAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD* 201
R K LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A +
Sbjct: 303 RVKHILSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTF 362
Query: 202 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 318
++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 363 SEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 70.9 bits (166), Expect = 9e-14
Identities = 37/103 (35%), Positives = 62/103 (60%)
Frame = +1
Query: 10 TACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDA 189
TA ER K+ LS++ A + ++ + ID + I R+ FEEL L P+EK+L A
Sbjct: 271 TAVERLKKVLSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELA 330
Query: 190 KMD*AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 318
+ ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 331 GIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 67.3 bits (157), Expect = 1e-12
Identities = 32/96 (33%), Positives = 56/96 (58%)
Frame = +1
Query: 16 CERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKM 195
CE KR LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M
Sbjct: 291 CEITKRVLSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANM 350
Query: 196 D*AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 303
+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 351 EPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1
Query: 132 QLLKTSTSDRRVEVDTLEE*IDFNAR 55
+LLKT T+ RVE++ + IDFN R
Sbjct: 207 KLLKTKTNLPRVELEEMGPRIDFNIR 232
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 3.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 228 HEYDVVNLGLVHLRIAEGLFDGLHCRSEQISVQLLKTSTSD 106
HEY+V+ L E LF G++ R E + ++L + D
Sbjct: 931 HEYNVIKGLLEEYYNVEKLFSGINKREEDVILRLRDENKDD 971
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 5.6
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 149 DLQWSPSKSPSAMRRWTRPRFTTSYSWAG 235
D+ W P KS + P F + W G
Sbjct: 141 DIHWKPGKSLFRKNKKLPPNFFDYFQWTG 169
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 24.2 bits (50), Expect = 9.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 73 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMD 198
SL G+D+YT I E +A +S+ E +K D + D
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEAD 370
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,679,830
Number of Sequences: 5004
Number of extensions: 28037
Number of successful extensions: 94
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 172312850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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