Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M22
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   1.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   8.5  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   8.5  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   8.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.5  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.5  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   8.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.5  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 97  RSRYPRRVNRFQCSPEWKRTVSSSPSHRPCLV 2
           RS    RV    CSP ++  + S+P   P +V
Sbjct: 41  RSLKAHRVVLSACSPYFRELLKSTPCKHPVIV 72


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 211 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 318
           +D ++VGG      V   L +  N K L     PDE
Sbjct: 69  YDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDE 104


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 97  RSRYPRRVNRFQCSPEWKRTVSSSPSHRPCLV 2
           RSR  R   RF  S   +R+ SSS S  P L+
Sbjct: 18  RSRSRRYSKRFSSSIVDRRSPSSSRSPSPSLL 49


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 140 ICSDLQWSPSKSPSAMRRWTRPR 208
           I  D +W    +    R W+RPR
Sbjct: 29  ITGDEKWVVYNNIKRKRSWSRPR 51


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 1   ARGTACERAKRTLSSSTQASIEIDSLFEGIDFY 99
           A G        TL SST A++   S  + ID Y
Sbjct: 254 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY 286


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 1   ARGTACERAKRTLSSSTQASIEIDSLFEGIDFY 99
           A G        TL SST A++   S  + ID Y
Sbjct: 254 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY 286


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +3

Query: 198  LGPDSRHRTRGRVHSHS*SAEAP 266
            +GP   H T    HS S S   P
Sbjct: 1759 MGPPVGHPTNASAHSRSGSQSMP 1781


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 140 ICSDLQWSPSKSPSAMRRWTRPR 208
           I  D +W    +    R W+RPR
Sbjct: 150 ITGDEKWVVYNNIKRKRSWSRPR 172


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 1   ARGTACERAKRTLSSSTQASIEIDSLFEGIDFY 99
           A G        TL SST A++   S  + ID Y
Sbjct: 193 ALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY 225


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 161 SPSKSPSAMRRWTRPRFTTSYSWAGPLAFLKCRSS 265
           SP+ SPS   +       T+ S  G    L+C +S
Sbjct: 740 SPNASPSPAEQCASTTTITARSPQGSQGLLQCATS 774


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,137
Number of Sequences: 438
Number of extensions: 2310
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)