Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M19
(524 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 252 2e-67
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 252 2e-67
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 252 2e-67
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 241 5e-64
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 175 2e-44
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 99 3e-21
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 252 bits (618), Expect = 2e-67
Identities = 122/163 (74%), Positives = 135/163 (82%), Gaps = 1/163 (0%)
Frame = +3
Query: 39 MAAVKIKAFERR-QEGCKKKIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASE 215
MA K K + ++G KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+
Sbjct: 1 MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASD 60
Query: 216 GLLGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 395
L GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 61 YLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 120
Query: 396 QTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQ 524
QTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 121 QTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 163
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 252 bits (618), Expect = 2e-67
Identities = 122/163 (74%), Positives = 135/163 (82%), Gaps = 1/163 (0%)
Frame = +3
Query: 39 MAAVKIKAFERR-QEGCKKKIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASE 215
MA K K + ++G KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+
Sbjct: 1 MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASD 60
Query: 216 GLLGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 395
L GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 61 YLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 120
Query: 396 QTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQ 524
QTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 121 QTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 163
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 252 bits (618), Expect = 2e-67
Identities = 122/163 (74%), Positives = 135/163 (82%), Gaps = 1/163 (0%)
Frame = +3
Query: 39 MAAVKIKAFERR-QEGCKKKIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASE 215
MA K K + ++G KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+
Sbjct: 1 MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASD 60
Query: 216 GLLGRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKW 395
L GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKW
Sbjct: 61 YLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKW 120
Query: 396 QTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQ 524
QTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 121 QTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 163
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 241 bits (589), Expect = 5e-64
Identities = 118/164 (71%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
Frame = +3
Query: 39 MAAVKIKAFERR-QEGCKKKIVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASE 215
MA K K + ++G KKK+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+
Sbjct: 1 MAVGKNKGLSKGGKKGGKKKVVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASD 60
Query: 216 GLLGRVFEVSLA-DLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKK 392
GRVFEVSL DLQ D D E SFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKK
Sbjct: 61 YFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKK 120
Query: 393 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQ 524
WQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +Q
Sbjct: 121 WQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQ 164
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 175 bits (427), Expect = 2e-44
Identities = 83/100 (83%), Positives = 87/100 (87%)
Frame = +3
Query: 225 GRVFEVSLADLQADSDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 404
GRVFEVSLADLQ D D ERSFRKFRLIAEDVQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 405 IEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQ 524
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 113
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = +3
Query: 351 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDTLSQRKTCYAQHTQ 524
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +Q
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQ 58
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,294,135
Number of Sequences: 53049
Number of extensions: 554801
Number of successful extensions: 1401
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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