Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M16
         (212 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U90654-1|AAB86592.1|  341|Homo sapiens zinc-finger domain-contai...    30   1.6  
AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.         30   1.6  
AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.         30   1.6  
AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.         30   1.6  
AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.         30   1.6  
AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.    30   1.6  
AF144237-1|AAD33924.1|  797|Homo sapiens LOMP protein protein.         30   1.6  
AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein.     30   1.6  

>U90654-1|AAB86592.1|  341|Homo sapiens zinc-finger
           domain-containing protein protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148 ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
           ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 209 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 254


>AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148  ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
            ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 1217 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 1262


>AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148  ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
            ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 1217 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 1262


>AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148  ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
            ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 1217 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 1262


>AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148  ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
            ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 1217 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 1262


>AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.
          Length = 1349

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148  ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
            ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 1217 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 1262


>AF144237-1|AAD33924.1|  797|Homo sapiens LOMP protein protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148 ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
           ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 665 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 710


>AB020665-1|BAA74881.2| 1557|Homo sapiens KIAA0858 protein protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -2

Query: 148  ITCIN*GWRWRPLSHIPPPTRGHTVX*RRXIXLSQSMNPRAEXPAA 11
            ++  N  +   P S +PPP+ G        +  +QS  PR+  P+A
Sbjct: 1438 VSTSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSA 1483


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,082,071
Number of Sequences: 237096
Number of extensions: 546213
Number of successful extensions: 1187
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 76,859,062
effective HSP length: 49
effective length of database: 65,241,358
effective search space used: 1370068518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)