Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M16
         (212 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p pro...    26   8.2  
AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p pro...    26   8.2  
AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA...    26   8.2  

>BT023778-1|AAZ41787.1| 2016|Drosophila melanogaster LD21067p protein.
          Length = 2016

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 86   PGRRRDMRQWPPPPTLVDTSNAVQA 160
            PG  +D+  +PPPPT   T++++ A
Sbjct: 941  PGLSQDIPLYPPPPTGSTTASSIFA 965


>AY128444-1|AAM75037.1| 1332|Drosophila melanogaster LD21041p
           protein.
          Length = 1332

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 86  PGRRRDMRQWPPPPTLVDTSNAVQA 160
           PG  +D+  +PPPPT   T++++ A
Sbjct: 257 PGLSQDIPLYPPPPTGSTTASSIFA 281


>AE014134-1407|AAF52607.1| 2016|Drosophila melanogaster CG8552-PA
            protein.
          Length = 2016

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 86   PGRRRDMRQWPPPPTLVDTSNAVQA 160
            PG  +D+  +PPPPT   T++++ A
Sbjct: 941  PGLSQDIPLYPPPPTGSTTASSIFA 965


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,418,038
Number of Sequences: 53049
Number of extensions: 161709
Number of successful extensions: 364
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 24,988,368
effective HSP length: 50
effective length of database: 22,335,918
effective search space used: 446718360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)