Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M13
(413 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical pr... 97 4e-21
U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin iso... 91 4e-19
U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin pro... 85 1e-17
U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin pro... 85 1e-17
U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1 p... 42 1e-04
AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical ... 42 1e-04
Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.001
U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin iso... 37 0.007
AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical ... 36 0.012
U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin pro... 34 0.047
U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 31 0.25
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 31 0.25
AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical ... 30 0.58
AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical ... 30 0.58
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 29 1.8
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 29 1.8
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 29 1.8
Z73425-4|CAA97786.1| 667|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical p... 27 4.1
U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin iso... 27 4.1
U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin pro... 27 4.1
U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin iso... 27 4.1
>Z92784-1|CAB07192.1| 204|Caenorhabditis elegans Hypothetical
protein F31C3.1 protein.
Length = 204
Score = 97.1 bits (231), Expect = 4e-21
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = +3
Query: 174 MAAFATVLGILLFFAVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVD 353
M + V +L A+AQ +D+ KGPKVT KV F M+IG + +G IVIGLFGKTVPKT
Sbjct: 1 MKSLLVVAAVLAVGALAQGDDA-KGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTAT 59
Query: 354 NFYQLAQKPEGEGYKGSKF 410
NF +LA+KP+GEGY GSKF
Sbjct: 60 NFIELAKKPKGEGYPGSKF 78
>U31948-1|AAC47126.1| 204|Caenorhabditis elegans cyclophilin
isoform 5 protein.
Length = 204
Score = 90.6 bits (215), Expect = 4e-19
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = +3
Query: 234 DSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKF 410
D KGPKVT KV F M+IG + +G IVIGLFGKTVPKT NF +LA+KP+GEGY GSKF
Sbjct: 20 DDAKGPKVTDKVYFDMEIGGKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKF 78
>U27354-1|AAC47124.1| 201|Caenorhabditis elegans cyclophilin
protein.
Length = 201
Score = 85.4 bits (202), Expect = 1e-17
Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = +3
Query: 204 LLFF--AVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQK 377
LLFF A+ +GP+VT KV F M+IG VG IVIGLFG+ VPKTV NF +LAQ+
Sbjct: 5 LLFFVLAILALSAEARGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQR 64
Query: 378 PEGEGYKGSKF 410
EGEGY GSKF
Sbjct: 65 AEGEGYVGSKF 75
>U00051-7|AAA91355.1| 201|Caenorhabditis elegans Cyclophylin
protein 6 protein.
Length = 201
Score = 85.4 bits (202), Expect = 1e-17
Identities = 43/71 (60%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Frame = +3
Query: 204 LLFF--AVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQK 377
LLFF A+ +GP+VT KV F M+IG VG IVIGLFG+ VPKTV NF +LAQ+
Sbjct: 5 LLFFVLAILALSAEARGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQR 64
Query: 378 PEGEGYKGSKF 410
EGEGY GSKF
Sbjct: 65 AEGEGYVGSKF 75
>U30943-1|AAC47116.1| 192|Caenorhabditis elegans cyclophilin-1
protein.
Length = 192
Score = 42.3 bits (95), Expect = 1e-04
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKF 410
KV F + IG+E G + + LF VPKT +NF L +G G +KGSKF
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKF 78
>AL033512-4|CAA22075.1| 192|Caenorhabditis elegans Hypothetical
protein Y49A3A.5 protein.
Length = 192
Score = 42.3 bits (95), Expect = 1e-04
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKF 410
KV F + IG+E G + + LF VPKT +NF L +G G +KGSKF
Sbjct: 23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKF 78
>Z92822-6|CAB07303.1| 172|Caenorhabditis elegans Hypothetical
protein ZK520.5 protein.
Length = 172
Score = 40.7 bits (91), Expect = 4e-04
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSK 407
KV F + IG + G IV+ L+ VPKT +NF L +G+G G K
Sbjct: 5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKK 52
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.1 bits (87), Expect = 0.001
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +3
Query: 216 AVAQSEDSPKGPKVTHKVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGY 395
A + S S K P+V V KIG +G IVI L PKT +NF L G GY
Sbjct: 128 ATSSSSASTKLPRVYLGV----KIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGY 183
Query: 396 KGSKF 410
+GS F
Sbjct: 184 EGSIF 188
>U34354-1|AAC47127.1| 171|Caenorhabditis elegans cyclophilin
isoform 2 (cyp-2) protein.
Length = 171
Score = 36.7 bits (81), Expect = 0.007
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSK 407
KV + IG + G IV+ L+ PKT +NF L +G+G G K
Sbjct: 5 KVFIDITIGGKKGGRIVMELYNDIAPKTAENFRALCTGEKGKGKSGKK 52
>AL032663-1|CAA21760.1| 171|Caenorhabditis elegans Hypothetical
protein Y75B12B.2 protein.
Length = 171
Score = 35.9 bits (79), Expect = 0.012
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKF 410
+V F + I + G IV+ L+ VPKT +NF L +G G +KGSKF
Sbjct: 5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKF 60
>U27559-1|AAC47125.1| 171|Caenorhabditis elegans cyclophilin
protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.047
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEG-------YKGSKF 410
+V F + + G IV+ L+ VPKT +NF L +G G +KGSKF
Sbjct: 5 RVFFDITTAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKF 60
>U64844-6|ABC71797.1| 174|Caenorhabditis elegans Hypothetical
protein T22F3.12 protein.
Length = 174
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLAQKPEGEGYKGSKF 410
KV + +G +V L + PKT +NF +L P G GYK F
Sbjct: 4 KVFMDITADGAPLGKLVFELNTEKCPKTCENFVKLCTGPPGFGYKNCVF 52
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +3
Query: 267 VTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLA---QKPEG--EGYKGSKF 410
V + G +G IVI LF P+T +NF Q K +G GYK F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTF 71
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +3
Query: 267 VTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQLA---QKPEG--EGYKGSKF 410
V + G +G IVI LF P+T +NF Q K +G GYK F
Sbjct: 19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTF 71
>AL110500-6|CAB60429.1| 629|Caenorhabditis elegans Hypothetical
protein Y87G2A.6 protein.
Length = 629
Score = 30.3 bits (65), Expect = 0.58
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 234 DSPKGPKVTHK-VTFHMKIGDEAVGNIVIGLFGKTVPKTVDNF 359
D+ G KV +K H GD I I LFG PKTV+NF
Sbjct: 464 DTEGGEKVLNKEAIIHTSFGD-----ITIRLFGDECPKTVENF 501
>AC006720-2|AAF60445.3| 262|Caenorhabditis elegans Hypothetical
protein Y17G9B.4 protein.
Length = 262
Score = 30.3 bits (65), Expect = 0.58
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 267 VTFHMKIGDEAVGNIVIGLFGKTVPKTVDNF 359
V H+ IG G IVI LF VP+T NF
Sbjct: 99 VFIHVSIGGIEEGCIVIQLFNDIVPRTAQNF 129
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 273 FHMKIGDEAVGNIVIGLFGKTVPKTVDNF 359
F + I E G IV L+ P+TV+NF
Sbjct: 13 FDISINGEPAGRIVFSLWNHCCPRTVENF 41
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 273 FHMKIGDEAVGNIVIGLFGKTVPKTVDNF 359
F + I E G IV L+ P+TV+NF
Sbjct: 13 FDISINGEPAGRIVFSLWNHCCPRTVENF 41
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 273 FHMKIGDEAVGNIVIGLFGKTVPKTVDNF 359
F + I E G IV L+ P+TV+NF
Sbjct: 13 FDISINGEPAGRIVFSLWNHCCPRTVENF 41
>Z73425-4|CAA97786.1| 667|Caenorhabditis elegans Hypothetical
protein F12F6.8 protein.
Length = 667
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 404 ASLVALSLWFLCQLIEV-VYSLRNSLAEKTNNNVPYCFITNFHVKSYLMSNFRS 246
+SL+ L+ + + IE Y+ N + + ++NV YC + SY++S R+
Sbjct: 3 SSLLELTAYKVADYIERGKYNKMNYILDAKSSNVIYCHLRKMRSSSYILSKDRT 56
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 27.5 bits (58), Expect = 4.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 396 CSPLPLVSVPADRSCLQSSEQSC 328
C+P+ +PA +SCL E C
Sbjct: 105 CNPMTSTPIPASQSCLPECENRC 127
>Z48245-2|CAA88291.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQL 368
+V + + + +G I I LF + PKT +NF L
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRAL 40
>Z37139-10|CAA85495.1| 309|Caenorhabditis elegans Hypothetical
protein T27D1.1 protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQL 368
+V + + + +G I I LF + PKT +NF L
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRAL 40
>U95074-2|AAB94648.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQL 368
+V + + + +G I I LF + PKT +NF L
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRAL 40
>U58755-8|AAB00697.1| 169|Caenorhabditis elegans Cyclophylin
protein 12 protein.
Length = 169
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 291 DEAVGNIVIGLFGKTVPKTVDNFYQLAQK 377
D +G I + L+ P+T NF QLA++
Sbjct: 15 DTTMGKIALELYWNHAPRTCQNFSQLAKR 43
>U36581-1|AAC47131.1| 309|Caenorhabditis elegans cyclophilin
isoform 9 protein.
Length = 309
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 264 KVTFHMKIGDEAVGNIVIGLFGKTVPKTVDNFYQL 368
+V + + + +G I I LF + PKT +NF L
Sbjct: 6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRAL 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,900,196
Number of Sequences: 27780
Number of extensions: 165672
Number of successful extensions: 433
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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