Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_M11
(368 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13979-1|CAA32160.2| 182|Homo sapiens protein ( Homo sapiens DN... 31 1.2
M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein. 29 3.5
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein. 29 3.5
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein. 29 3.5
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ... 29 3.5
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ... 29 3.5
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ... 29 3.5
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ... 29 3.5
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 29 3.5
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 29 3.5
AF016694-1|AAB71687.1| 246|Homo sapiens small intestinal mucin ... 29 3.5
>X13979-1|CAA32160.2| 182|Homo sapiens protein ( Homo sapiens DNA
fragment TVRI-6 repetitive region. ).
Length = 182
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 140 SNQRISLVGSGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSISTKHL 304
S+ ++ + PP +R L T+ PT TT RPV+ + V P SSIS + L
Sbjct: 96 SDPGLATPATSPPSPRR--LSTK-PTVPPTTSQPRPVSDSGVQPPASSSISPRSL 147
>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
1-like 1 protein.
Length = 1456
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 7 GDLVSIETQEENNLIFKLIQQNDVPYIWTSGRL 105
GDLVSI+++ E ++K + +ND + G L
Sbjct: 833 GDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLL 865
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSIST 295
S PP A+ + T P+ G+T R PV+ V+ + S++ST
Sbjct: 1022 SPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLST 1064
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSIST 295
S PP A+ + T P+ G+T PV+ +V+ + S++ST
Sbjct: 3261 SSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLST 3303
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSISTKHLS 307
S PP A+ T PT+ ++ G P+TR VS TM +S T LS
Sbjct: 2318 SPPPTAEG----TSMPTS-TSSEGNTPLTRMPVSTTMVASFETSTLS 2359
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSIST 295
S PP A+ + T P+ G+T R PV+ V+ + S++ST
Sbjct: 1022 SPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLST 1064
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSIST 295
S PP A+ + T P+ G+T PV+ +V+ + S++ST
Sbjct: 3261 SSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLST 3303
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSISTKHLS 307
S PP A+ T PT+ ++ G P+TR VS TM +S T LS
Sbjct: 2318 SPPPTAEG----TSMPTS-TSSEGNTPLTRMPVSTTMVASFETSTLS 2359
>AF016694-1|AAB71687.1| 246|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 246
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 167 SGPPIAKRFHLQTRFPTAGATTHGRRPVTRNSVSPTMQSSIST 295
S PP A+ + T P+ G+T R PV+ V+ + S++ST
Sbjct: 20 SPPPTAEGTSMPTSTPSEGSTPLTRMPVSTTMVASSETSTLST 62
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.134 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,331,111
Number of Sequences: 237096
Number of extensions: 1173770
Number of successful extensions: 6480
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6480
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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