Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M10
         (413 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   2.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.8  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           22   7.7  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           22   7.7  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 16  LGVLCCQSSHPSKHKNAVCRKIDR 87
           LGV  C+  H S+H   V  K  R
Sbjct: 729 LGVDLCRKQHHSRHLERVANKASR 752


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 137 LAAVPTHTQIVPVAPAQLSA 196
           +AA PT  Q +P APA  S+
Sbjct: 932 VAAAPTQQQPLPPAPAAASS 951


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +2

Query: 119 TALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVT 226
           T  V P       T    VAP   + V   QTT+ T
Sbjct: 33  TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTT 68


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +2

Query: 119 TALVRPLAAVPTHTQIVPVAPAQLSAVRTFQTTSVT 226
           T  V P       T    VAP   + V   QTT+ T
Sbjct: 33  TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTT 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,508
Number of Sequences: 2352
Number of extensions: 7999
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)