Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M09
         (287 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6N8J0 Cluster: DNA polymerase; n=2; Fusarium prolifera...    33   1.6  
UniRef50_Q9RDZ3 Cluster: Putative uncharacterized protein; n=5; ...    32   2.1  
UniRef50_A7TJP8 Cluster: Putative uncharacterized protein; n=1; ...    32   2.8  
UniRef50_Q07979 Cluster: Chromatin structure-remodeling complex ...    30   8.6  

>UniRef50_A6N8J0 Cluster: DNA polymerase; n=2; Fusarium
            proliferatum|Rep: DNA polymerase - Gibberella intermedia
            (Bulb rot disease fungus) (Fusariumproliferatum)
          Length = 1847

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -1

Query: 272  ILLNFRNNIRYI*AFSS*LEIFLN*FLYFLCMATDVILF 156
            I LN +N I YI   S+   IF+N  L+ LC+ T +ILF
Sbjct: 1464 IKLNIKNFINYI--VSNIKGIFINFILFILCIITSIILF 1500


>UniRef50_Q9RDZ3 Cluster: Putative uncharacterized protein; n=5;
           Legionella pneumophila|Rep: Putative uncharacterized
           protein - Legionella pneumophila
          Length = 548

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -3

Query: 198 IFVLPMYGN--RCHSFFQR*NFSYKYPSSSSHIKSRSTDVTTHSKA 67
           +FV P Y N      F ++ NF + YPS S +IKS+S   ++ SK+
Sbjct: 34  LFVSPPYVNLENDSKFCEKNNFPFYYPSKSLNIKSKSGHESSSSKS 79


>UniRef50_A7TJP8 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 941

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -2

Query: 274 KYCSTSEIILGIFKRLVHNWKYF*TNF 194
           KY ST E I    KRLV+N+KYF  N+
Sbjct: 880 KYLSTVENITSEIKRLVNNYKYFMKNY 906


>UniRef50_Q07979 Cluster: Chromatin structure-remodeling complex
           protein RSC58; n=3; Saccharomycetales|Rep: Chromatin
           structure-remodeling complex protein RSC58 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 502

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = +2

Query: 80  VVTSVERDLIWLEELGY--LYEK 142
           VV S  R LIWLE +GY  LYEK
Sbjct: 300 VVDSTTRGLIWLERIGYMDLYEK 322


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,132,263
Number of Sequences: 1657284
Number of extensions: 4252614
Number of successful extensions: 9318
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9318
length of database: 575,637,011
effective HSP length: 73
effective length of database: 454,655,279
effective search space used: 10002416138
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)