Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_M09
         (287 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   3.0  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    21   9.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    21   9.1  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 44  DKDTRMISAFECVVTSVERD 103
           D DT+++ +F C+ T V  +
Sbjct: 605 DSDTKVVQSFVCINTLVSEE 624


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/38 (21%), Positives = 19/38 (50%)
 Frame = +2

Query: 32  ISTDDKDTRMISAFECVVTSVERDLIWLEELGYLYEKF 145
           I   DKD  ++  ++ V   ++R  +W+  +  ++  F
Sbjct: 441 IKDADKDNEIVEDWKFVSMVLDRFFLWVFTISCIFGTF 478


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 271  YCSTSEIILGIFKRLVHNWKY 209
            +C T   ++ I  R++  W Y
Sbjct: 984  FCETEGFMVAIQDRVIATWNY 1004


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,242
Number of Sequences: 2352
Number of extensions: 3801
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17384760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)